Protein Info for MPMX19_06676 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 558 transmembrane" amino acids 513 to 515 (3 residues), see Phobius details PF13432: TPR_16" amino acids 14 to 72 (59 residues), 20.2 bits, see alignment 2.3e-07 amino acids 43 to 103 (61 residues), 24.1 bits, see alignment E=1.4e-08 amino acids 214 to 270 (57 residues), 15.6 bits, see alignment 6.5e-06

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (558 amino acids)

>MPMX19_06676 hypothetical protein (Azospirillum sp. SherDot2)
MATTGDVLRLAADHHTAGRLEEAMALYRLVLRVDPVNADGWRLLGKAARAAGDYGAGLGC
LQRLIALSPADATMFAELAALLAEQGDEAGALAAYGVALRCDPLMEQAAFQRGILLFRRG
ALKQAEAAFRGVGLLVPALAMAHVNRGAVLHALGCQEMAEVALARGRRLAPEAVEAVLNS
ALVAIAQGRLPDVERYGRRVIALAPDSVQGYALFANARVHLGRPQDGVAAYNRALDIESD
NSELKVNRGVARLLLGEMAGGWDDLAARWETTASPGVGDDLPRWSGSAIPAGRLLVVGQA
GVGDEILFASLIPDLVESGIACRFVCDTRLVSLLRRSLKGTEVVGRDADPSVMATPALVD
DSVARVPASDLPRYLRRRPEDFAGQRPYLVADPQRIAALRARHRDVQLCIGLSWRSVAST
ERSLGLEQLVAALAPGVAAAGGRLISLQYGVDDQERRIAGLFHETSVDPSGDLDGFASLV
AAMDLVITIDNTTAHMAGGLGVPGWVLLPFMPAWFWGGAAATSPWYPSLRLFRQTAPGDW
RGVLGEVGRALRSVGGTP