Protein Info for MPMX19_06643 in Azospirillum sp. SherDot2

Annotation: Beta-barrel assembly-enhancing protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 644 PF13432: TPR_16" amino acids 11 to 70 (60 residues), 29.9 bits, see alignment 3.6e-10 amino acids 51 to 104 (54 residues), 24 bits, see alignment 2.6e-08 amino acids 182 to 240 (59 residues), 24.6 bits, see alignment 1.7e-08 PF13181: TPR_8" amino acids 38 to 70 (33 residues), 13.9 bits, see alignment (E = 3.1e-05) amino acids 72 to 104 (33 residues), 27.8 bits, see alignment (E = 1.1e-09) amino acids 178 to 209 (32 residues), 12.6 bits, see alignment (E = 8.3e-05) PF13176: TPR_7" amino acids 40 to 74 (35 residues), 14.1 bits, see alignment (E = 2.5e-05) PF07719: TPR_2" amino acids 72 to 104 (33 residues), 23.6 bits, see alignment (E = 2.4e-08) PF00515: TPR_1" amino acids 72 to 104 (33 residues), 29.3 bits, see alignment (E = 3.3e-10)

Best Hits

KEGG orthology group: None (inferred from 55% identity to azl:AZL_f01000)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (644 amino acids)

>MPMX19_06643 Beta-barrel assembly-enhancing protease (Azospirillum sp. SherDot2)
MATVAEALQIAVGLQRADRLDEARAVYLRILEVDPRNAHALHLLGLIERRQNRRDKALEL
IRAALGIAPEMADAACNLGSTLSELGQIDAAAAAYRRAIQLDPSLEGAHQALASLLGGRG
GPRDWATAAVAYRRALRLNPYRSESYHDLGIALRQDGAVEEAQASQRNALVLHPGFAGAH
MNLGNLLVEVGGLNEALTCFRRALLIQPGHGSVLYNQGNAQHAAGLADAAVDSYAGAARA
GLNMALTRLADVLTGLDRLAEAEQVLRLALTQPGSDVPGAIDMLSALLARQGRHEEARRF
FADYRYPHAADPAMFRIECLTAVAENWLAAGETDRAVEVLAGVHGHGSRFFTVKSIAGLQ
QSLARQGRRLERPANPDPSLPRICSSTLATHGRFAHNVLEYVLLRLYAEKFGYRLETPDW
VGGHYFDLDDPRPGGGLKPMHFGRRILNDLVTGRCCDPRPGVDILSPLFLFDYRDEWRER
VQSWLRPRPDWLPYVDPVMQALKARGNTVVALHIRRGDFVWFRYTITETSWYVDWLKALW
PTLDRPVLYIATDDPATIGDFAEFAPVSLDDLAKDGAVEPWKGLEFLQDFHVLMNADVLG
VSAQSGYSQLAALLNRNARLFVEPDAAAQRIRPYSPWTSSSGTP