Protein Info for MPMX19_06558 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 492 PF00082: Peptidase_S8" amino acids 8 to 228 (221 residues), 52.3 bits, see alignment E=5.7e-18 PF16841: CBM60" amino acids 302 to 392 (91 residues), 106.3 bits, see alignment E=8.8e-35

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (492 amino acids)

>MPMX19_06558 hypothetical protein (Azospirillum sp. SherDot2)
MANSTYTGRGETVVVIDSGWSPTWESAARIVYQHDYANNDADARNPNADTHGALVTSSIL
SQAPDLNIVALKVIPDGTSTASGAAIEQALQWVVAHASDYNVVGVNLSLAGGSATSEMTT
LLSDELASLAAKRVLVSAAAGNAGQNGTATDVSYFAADHNTICVSASGGDGTMPGWAQRN
PGITDLCADGTDIRLTDLAGRTVTANGSSFSAPSVTAAVALAQQEAIALRGSALTQDEFL
SLAKQTGTPVAGTGYTDLNTQALLAKIGQLYGTTATPTVPDPTPGPTPGPGTGAPATATA
AILVNAKGTAAAGVNAHFTLLVDGHAVGSATVGAAAKNYAFTATVSADSAHKVQIQYDND
GFAGGQDRNLFVNSVSVNGHSYAATDAAVTYDKGALDGHDVVKGQSGLWWNGTLVVAADK
SLFGVQAPAQAQVAELQAGDLLGHAVSANAATYGTDAHETAHVAGWTPDLLPAFQYADHG
LYAWHDAHDMAA