Protein Info for MPMX19_06546 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 509 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details transmembrane" amino acids 26 to 45 (20 residues), see Phobius details amino acids 79 to 100 (22 residues), see Phobius details amino acids 118 to 139 (22 residues), see Phobius details amino acids 151 to 169 (19 residues), see Phobius details amino acids 175 to 197 (23 residues), see Phobius details amino acids 217 to 237 (21 residues), see Phobius details amino acids 240 to 254 (15 residues), see Phobius details amino acids 260 to 283 (24 residues), see Phobius details amino acids 294 to 316 (23 residues), see Phobius details amino acids 327 to 352 (26 residues), see Phobius details amino acids 364 to 384 (21 residues), see Phobius details amino acids 390 to 411 (22 residues), see Phobius details amino acids 421 to 442 (22 residues), see Phobius details amino acids 448 to 467 (20 residues), see Phobius details PF01943: Polysacc_synt" amino acids 4 to 282 (279 residues), 40 bits, see alignment E=1.7e-14

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_f00070)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (509 amino acids)

>MPMX19_06546 hypothetical protein (Azospirillum sp. SherDot2)
MAAALLSIPLLISAVGMERFGALTLIWALLGYLGVLDLGLGRSLVQVVADRIGHAGGPGE
TPEEAGQGLANTAGIAGPAIALMGAIGILTGGAVALGAGLLADRFQLETGTSPDEIRLSL
LVAAAIVPIALISAGLRGVLEAHQRFRPISLVRMTVGVLNYLSPLFVLPFSQSLVPVIAA
IAVGRFIGLVGYGVLAVRQVPDLLRPGRWGRPALRGLFTMSAWMMLNNLVGPAMLYADRF
ILLSLVPAAMVAFYTTPFELLSRLMVIPGALSLALFPLASSLFRRDPPALGRILDAGGHL
TLAVFLAMQAATIVGGETALELWLGPAFAANSASVLSILMLGVFFNATAYVPNTLIQSVG
RVDVTARLQLVELPVYLGVLWLLAERYGAVGAAAAWSLRTAVDCGLLLVLLPRLAPGTGT
VALTIGLRALLAGVAGLAGLLVGGPVGAAISLTGLLAVGLGVAGRLLRTRSWEKLAAPLR
KSRAVPLPAALPAPRMNGQAIDGAAADRP