Protein Info for MPMX19_06492 in Azospirillum sp. SherDot2

Annotation: IS5 family transposase ISAzs10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 359 transmembrane" amino acids 336 to 350 (15 residues), see Phobius details PF05598: DUF772" amino acids 54 to 124 (71 residues), 83 bits, see alignment E=1.9e-27 PF01609: DDE_Tnp_1" amino acids 205 to 349 (145 residues), 48.8 bits, see alignment E=1.2e-16 PF13751: DDE_Tnp_1_6" amino acids 295 to 352 (58 residues), 27.9 bits, see alignment E=3.7e-10

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_014180)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (359 amino acids)

>MPMX19_06492 IS5 family transposase ISAzs10 (Azospirillum sp. SherDot2)
MMRGSDERSEGLFSYVSCEARVPANHPLRPIRAIVDEALEVMSPAFEGLYSKIGRPSIPP
EKLLRALLLQAFYSVRSERQLMEQLDYNLLFRWFVGLSMDAPVWDVTVFTKNRERLLAGD
VAATFLATVLGQPKVKALLSDEHFSVDGTLIEAWASVKSFRPKDGSGEPPGPGRNGDRDF
HGEKRSNETHASTSDPEARLYRKGNGQPAKLAFMGHALMENRHALVVNVRLTAATGLAER
EAAVSMIEAIPGRHRITVGADKAYDTKDFVANMRSLGAAAHVAQNTSNRRSAIDGRTTRH
PGYAVSLRVRKRIEEVFGWIKGAGLRKTRHRGTARVGWMFTLTATAYNLIRLPKLLAAA