Protein Info for MPMX19_06371 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 471 transmembrane" amino acids 35 to 55 (21 residues), see Phobius details amino acids 69 to 91 (23 residues), see Phobius details amino acids 121 to 141 (21 residues), see Phobius details amino acids 147 to 168 (22 residues), see Phobius details amino acids 180 to 197 (18 residues), see Phobius details amino acids 272 to 290 (19 residues), see Phobius details amino acids 302 to 323 (22 residues), see Phobius details amino acids 342 to 363 (22 residues), see Phobius details amino acids 383 to 403 (21 residues), see Phobius details amino acids 416 to 437 (22 residues), see Phobius details amino acids 447 to 469 (23 residues), see Phobius details PF12801: Fer4_5" amino acids 74 to 112 (39 residues), 37.8 bits, see alignment 7.7e-14 amino acids 160 to 192 (33 residues), 26 bits, see alignment (E = 3.5e-10)

Best Hits

KEGG orthology group: None (inferred from 57% identity to rpc:RPC_3630)

MetaCyc: 53% identical to ferrous iron uptake system, polyferredoxin FtrD (Brucella abortus 2308)

Predicted SEED Role

"Ferredoxin" in subsystem Soluble cytochromes and functionally related electron carriers

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (471 amino acids)

>MPMX19_06371 hypothetical protein (Azospirillum sp. SherDot2)
MADCTTPSATHRGGLKRTLSGLGDWMARSRRLITGVQWAVIVIYAVLIIVPTLLPLPTNV
DHIWSHLTIFAQFVFWGIWWPGVILSMILFGRLWCGVLCPEGALSEQASAWSLGRAVPRW
ITWKGWPFVGFLGTTVYGQMISVYQYPAAVLVILGGSTAAAIAVALIWGRNKRVWCRHLC
PVNGVFALVSKLAPVHYRVDRDAWDRWRKPADGRSSVVNCAPLVPLRTLDGNAQCHMCGR
CSGFRDAIALDHRPFSQEIVHVAGREAKPWETALILVGLLGVAAGAFRWTGSSLFIDLKM
SFAELLLSLGADRLLDMVMPWWILTNYPENNDVMSVLDGVTLLAFIGAEALLAGLVFAGG
IALATRIAGGWSSVCFHHLTQGLIPISAIGVILGLSMTTVMLLRTNGLDLGFVDPLRALL
LVGATLWSAWLSARIVALHATSPSRRLLATGMMAILCVLAAVNWGTLFWSL