Protein Info for MPMX19_06356 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 412 transmembrane" amino acids 20 to 40 (21 residues), see Phobius details amino acids 58 to 80 (23 residues), see Phobius details amino acids 87 to 104 (18 residues), see Phobius details amino acids 110 to 135 (26 residues), see Phobius details amino acids 147 to 168 (22 residues), see Phobius details amino acids 178 to 197 (20 residues), see Phobius details amino acids 224 to 244 (21 residues), see Phobius details amino acids 259 to 279 (21 residues), see Phobius details amino acids 291 to 309 (19 residues), see Phobius details amino acids 315 to 337 (23 residues), see Phobius details amino acids 349 to 373 (25 residues), see Phobius details amino acids 379 to 401 (23 residues), see Phobius details PF07690: MFS_1" amino acids 27 to 293 (267 residues), 65.5 bits, see alignment E=2.1e-22

Best Hits

KEGG orthology group: None (inferred from 54% identity to sno:Snov_1285)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (412 amino acids)

>MPMX19_06356 hypothetical protein (Azospirillum sp. SherDot2)
MSRQALREGAPEPALPSSKAFISGLGVGQIVSWGSLIYSFPLLAEPMATDLGWSRTQVYL
LASLALGCAGLTAVPVGAAIDRGHGRVVMAAGSLLAAVLLWLWSTTPGDWSLIPVFAALG
LVQSMTLYEPAFAVVARRYGADARRGITALTLWGGFASTVFIPLTQLLLDRFGWRGTLEV
LALMNLALCVPLHLSVIDRRRSQASGASPSMDDRTVVRWAVRQTAFWGLGVAFTVYYAIF
SGMSFHLYPLLIERGLPTAAVVSAMALIGPAQVAGRIAIAAVARTASIREIGTATAAALP
VAFTLLLLAGHSTPLLIGFALLYGAANGVMTIIRGAAVPEMLTRSAYGAINGILTVPTAL
VRAFAPALAAMLWQWDGSYSPVIVAVIAASLVVLVSFTVAARSQVSDAQQQI