Protein Info for MPMX19_06338 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 321 transmembrane" amino acids 39 to 57 (19 residues), see Phobius details amino acids 74 to 98 (25 residues), see Phobius details amino acids 106 to 129 (24 residues), see Phobius details amino acids 136 to 154 (19 residues), see Phobius details amino acids 202 to 220 (19 residues), see Phobius details amino acids 232 to 249 (18 residues), see Phobius details amino acids 261 to 283 (23 residues), see Phobius details amino acids 295 to 316 (22 residues), see Phobius details PF03773: ArsP_1" amino acids 25 to 317 (293 residues), 225.7 bits, see alignment E=3.6e-71

Best Hits

KEGG orthology group: K07089, (no description) (inferred from 62% identity to mgm:Mmc1_0110)

Predicted SEED Role

"Transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (321 amino acids)

>MPMX19_06338 hypothetical protein (Azospirillum sp. SherDot2)
MFEVFTLLADWATYRLFSLTPGTKLADAVHFFIEDTSKIFVLLVLIVFVMGLFRTLLSPE
KVRGYIEGKSRGVGYVLAVVLGAVTPFCSCSSVPLFIGFLEGGIPVGVTMAFLITSPLVN
EVAVVILASIMGWKLTAVYVASGMGIGIIGGVLIDRLRMERYVEEYVWKIRMGAVARIET
DTSLGSRIRYAWGEVTDIVGRIWLYVIVGIGLGAALHGYVPQELFAEYASADNPFAVPVA
VLMGLPLYSNATGVIPVAEALLAKAVPIGTVIAFMMSVVAISPPEFIMLRKVLKVPMLAF
FGGFLTIAFILVGYLLNTLFA