Protein Info for MPMX19_06334 in Azospirillum sp. SherDot2
Annotation: Arsenite oxidase subunit AioB
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 46% identical to AIOB_ALCFA: Arsenite oxidase subunit AioB (aioB) from Alcaligenes faecalis
KEGG orthology group: K08355, arsenite oxidase small subunit [EC: 1.20.98.1] (inferred from 65% identity to pgv:SL003B_2334)MetaCyc: 62% identical to arsenite oxidase small subunit (Brucella tritici)
RXN-12586 [EC: 1.20.2.1]
Predicted SEED Role
"Arsenite oxidase small subunit precursor (EC 1.20.98.1)" (EC 1.20.98.1)
MetaCyc Pathways
- arsenite to oxygen electron transfer (2/2 steps found)
Isozymes
Compare fitness of predicted isozymes for: 1.20.98.1
Use Curated BLAST to search for 1.20.2.1 or 1.20.98.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (184 amino acids)
>MPMX19_06334 Arsenite oxidase subunit AioB (Azospirillum sp. SherDot2) MKECPRLAALGRRQFLRGGAVAAAGAAAVSVVSTAPARAAVPAARVDYPASRLANLRDLK ANEPMQIAYPDADSPGVLIKLGTSVDGGAGPDRDIVAYSTLCPHKGFPLAYDSTDKTLSC PGHFSRFDCEKEGQQVWGHATQNLAMFRLTVDTAGDIRAVGADELIYGRTRNVLSENTVS LRRG