Protein Info for MPMX19_06276 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 309 transmembrane" amino acids 20 to 37 (18 residues), see Phobius details amino acids 46 to 65 (20 residues), see Phobius details amino acids 77 to 101 (25 residues), see Phobius details amino acids 112 to 130 (19 residues), see Phobius details amino acids 137 to 159 (23 residues), see Phobius details amino acids 169 to 188 (20 residues), see Phobius details amino acids 200 to 218 (19 residues), see Phobius details amino acids 229 to 250 (22 residues), see Phobius details amino acids 258 to 281 (24 residues), see Phobius details amino acids 287 to 303 (17 residues), see Phobius details PF00892: EamA" amino acids 19 to 153 (135 residues), 52 bits, see alignment E=9.4e-18 amino acids 171 to 303 (133 residues), 60.3 bits, see alignment E=2.5e-20 PF06027: SLC35F" amino acids 105 to 301 (197 residues), 22.8 bits, see alignment E=6.3e-09

Best Hits

KEGG orthology group: None (inferred from 85% identity to azl:AZL_a09060)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (309 amino acids)

>MPMX19_06276 hypothetical protein (Azospirillum sp. SherDot2)
MSSTSIAAAGSSRAGANPALLSLLAGALAIALAPILVRVSELEPIATAFYRLVIALPFFW
LGMLAERKAPRSASARVTAADMALMGVAGLMLAGDLALWHLSITMTSVAKATLFNNCAPV
LVALLGWLLFGERIGLGLIVALAVSLSGMALLIGDGLFASVGSAAEGQWQGDAIAVSTAA
FYAVYLMAVKRLRSSHSTSVIMAGSSAAAALVLAVAASLEGGPLLPATAWGWAVVLALGV
ACHVIGQGLITHALAHLPVTFSSIGLLIQPVAAAALAWMLFGEALGPLQWLGGALALVGI
TLARRTSSR