Protein Info for MPMX19_06225 in Azospirillum sp. SherDot2

Annotation: Xylose import ATP-binding protein XylG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 531 PF00005: ABC_tran" amino acids 20 to 171 (152 residues), 104.7 bits, see alignment E=9.8e-34 amino acids 279 to 435 (157 residues), 58.2 bits, see alignment E=2.2e-19

Best Hits

Swiss-Prot: 63% identical to ARAG_GEOSE: L-arabinose transport ATP-binding protein AraG (araG) from Geobacillus stearothermophilus

KEGG orthology group: K10548, putative multiple sugar transport system ATP-binding protein (inferred from 96% identity to azl:AZL_e03670)

Predicted SEED Role

"L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)" in subsystem L-Arabinose utilization (TC 3.A.1.2.2)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (531 amino acids)

>MPMX19_06225 Xylose import ATP-binding protein XylG (Azospirillum sp. SherDot2)
MDSILEMRGITKTFPGVKALDNVNLSVRKGEIHALIGENGAGKSTLMKVLSGVYPHGTYE
GEIRFGGQPVAFRGIADSEKLGIIIIHQELALVPLLSITENLFLGNEQAKRGRIDWVAAT
ARARELLRMVGLTDSPETLITDIGVGKQQLVEIAKALSKQVKLLILDEPTASLNESDSDA
LLALLLRFKEQGISSILISHKLNEIAKVADRVTILRDGTTVETLDCHDAPISQDRIIKGM
VGRDLADRYPRRTSNPGRILFEVKDWSADHPIHAGRRVVKDIDLHVRRGEVVGIAGLMGA
GRTEFAMSLFGRSYGRNIRGQAFLDGREIDVSTIAKAMGNGLAYATEDRKHYGLVLDNDI
RHNVTLANLDGVAKRGVIHHEREIEVANEFRRRLRIRCSDVFQQTVNLSGGNQQKVVLSK
WLFADPQVLILDEPTRGIDVGAKYEIYTIVNQLVAEGRGVILISSELPELLGVADRIYVM
NEGALVAEMPAAEASQEKIMHAIMSSASKATAARAAVAAAALNNGARESLQ