Protein Info for MPMX19_06089 in Azospirillum sp. SherDot2

Annotation: Regulatory protein LuxO

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 480 PF00072: Response_reg" amino acids 16 to 123 (108 residues), 92.5 bits, see alignment E=6.1e-30 PF14532: Sigma54_activ_2" amino acids 154 to 324 (171 residues), 82.6 bits, see alignment E=1e-26 PF00158: Sigma54_activat" amino acids 154 to 319 (166 residues), 224.7 bits, see alignment E=1.8e-70 PF07728: AAA_5" amino acids 176 to 304 (129 residues), 27.5 bits, see alignment E=8.6e-10 PF02954: HTH_8" amino acids 427 to 467 (41 residues), 40.3 bits, see alignment 6.1e-14

Best Hits

KEGG orthology group: None (inferred from 88% identity to azl:AZL_e03810)

Predicted SEED Role

"Regulatory protein luxO"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (480 amino acids)

>MPMX19_06089 Regulatory protein LuxO (Azospirillum sp. SherDot2)
MSSLSTSSSSSKKRRILLIEDTVPLAKLYIEFLRADAHEVVHCTRGGEALDAAAASPPDA
VILDLKLPDMDGLEVLQALHARDASVSVVIITAHGSIDLAVEAMKLGAFDFIVKPFNADR
LNLTLRNALERRTLARMVEGYRKDLDRGRFHGFIGSSPEMQAVYRTIESVAASRANVFIT
GESGTGKEVAAQAIHRASPRRNGAFVALNCAAIPKDLLESEIFGHVKGAFTGAAGDRPGA
ALLADGGTLFLDEICEMPFDLQSKLLRFVQTGTVNPVGSGREERVDVRFVAATNRDPLAE
VQAARFREDLYYRLHVIPLALPPLRDRGDDVIEIARSFLFDYAREEGKALAAFTPEVEAR
LRAHDWPGNVRQLQNVIRNVVVLNDGPQVTLDMLPPMAGPDGSAAACAACGSPPADLPEG
DDAVQPLWQVEKEMIQKALRLTGDDVPRAALILEISPSTIYRKLQQWRIADGRSAGETAA