Protein Info for MPMX19_05966 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 725 transmembrane" amino acids 21 to 42 (22 residues), see Phobius details amino acids 352 to 374 (23 residues), see Phobius details PF21689: TorS_sensor_domain" amino acids 58 to 337 (280 residues), 36.6 bits, see alignment E=5.4e-13 PF00672: HAMP" amino acids 374 to 421 (48 residues), 29.7 bits, see alignment 1e-10 PF00015: MCPsignal" amino acids 528 to 688 (161 residues), 108.7 bits, see alignment E=4.5e-35

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_e03090)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (725 amino acids)

>MPMX19_05966 hypothetical protein (Azospirillum sp. SherDot2)
MTQLTPAGGRQSVRLGIQGRLFLAFGGVAILAAFASVMAWWSLTETGRSMGEIGRSSVPA
IVRSLTLAKDSTAIAADAPAVAASRDAAELTERMDGLTKRLAGLRDRIGAMRSQAGGGAD
GMAADADAVAKLLERMGAALDTLGKRTAERLAMEEKLNTLVADAVMAHEDFTDLVAPLLE
VSTLSVNNVVGDLAAAQAVDTATGLGRRLAQEELPVITQLMNVQANGNLAFGMIAAASSV
PHGATLNNIRSKYNWALLRVDNAIGALPKDSPDRPSLVKARDGLAAFGGGAGSVFRLRDE
QARITADIESALAETVRLTTDLNGTIDAVVAHQQERTDADVTRTETAISGAVAVQGGAAA
VVVLSSLLIAWFYVRNRLTRRLMRVIDAMRAVAGGDLAADAAVGGRDEIAEMAGIVGVFR
DKSAEIARLQEEQDAMKQAADAERSRTIQSITASIEASVKEASRHISAASADMREASEGM
SATAEQTCRRMTDVRSAVADTATNVQTVAATASQLSASIGEITRRVGDSSQIARSAVEEA
RSTNDLMVELATAAQKIGDVVGMINAIAGQTNLLALNATIEAARAGDAGKGFAVVAEEVR
SLAGQTAKATEEIAQQVQAVRTTAQGAVSAIDDIGRTISRIDEITAMVAAAVEEQSAATD
EIARSINHASDAVQSIADTVVSVDDAVNRTGSAAAQVVDATRALSQRSESLSEDIDRLLG
RIRAA