Protein Info for MPMX19_05935 in Azospirillum sp. SherDot2

Annotation: sugar efflux transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 381 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 39 to 57 (19 residues), see Phobius details amino acids 69 to 90 (22 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 127 to 149 (23 residues), see Phobius details amino acids 156 to 178 (23 residues), see Phobius details amino acids 203 to 226 (24 residues), see Phobius details amino acids 237 to 258 (22 residues), see Phobius details amino acids 269 to 286 (18 residues), see Phobius details amino acids 292 to 309 (18 residues), see Phobius details amino acids 329 to 350 (22 residues), see Phobius details amino acids 356 to 378 (23 residues), see Phobius details PF07690: MFS_1" amino acids 8 to 323 (316 residues), 153.2 bits, see alignment E=1.4e-48 PF05977: MFS_3" amino acids 31 to 356 (326 residues), 34.3 bits, see alignment E=1.5e-12 PF00083: Sugar_tr" amino acids 38 to 173 (136 residues), 31.7 bits, see alignment E=1.2e-11

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_e01390)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (381 amino acids)

>MPMX19_05935 sugar efflux transporter (Azospirillum sp. SherDot2)
MRLIFLLGLAGFASAFSLRTTDPMLTLIADDLGVTVRQAALLASAYTLPYALMQIVLGPV
GDAIGKSRLVRLALSVLTVGLVLSTIAPTYGTVMAGRILAGAFAGGIIPASMALIGDRVP
YEERQIAISRFLLAVILGQMSGSAVSGALAEAFGWRAVFGLSAGLTALICAAALIGLARE
VETRSPLSVAEAQRRYATVLTNPASLFVFATVAAEGLLIFGVFPFVAPVLIEHGAAGAFQ
AGLTIAAFAIGGVVYSAVVRRLIASLGQWGMMKAGGLAAGLAYLVIAFPVPWPVVSLAFL
VAGFGFYMLHNTMQTQATELAPTARGSALALFASSFFIGQGIGPVLYGYISTHTGFGPLF
LGVGTLTAGLGFASARLIRRR