Protein Info for MPMX19_05932 in Azospirillum sp. SherDot2

Annotation: Bifunctional protein PutA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1252 PF18327: PRODH" amino acids 40 to 87 (48 residues), 68.6 bits, see alignment (E = 8.9e-23) PF14850: Pro_dh-DNA_bdg" amino acids 95 to 211 (117 residues), 145.6 bits, see alignment E=1.7e-46 PF01619: Pro_dh" amino acids 221 to 519 (299 residues), 358 bits, see alignment E=8.2e-111 TIGR01238: delta-1-pyrroline-5-carboxylate dehydrogenase" amino acids 556 to 1057 (502 residues), 742.6 bits, see alignment E=9.7e-228 PF00171: Aldedh" amino acids 607 to 1054 (448 residues), 358.5 bits, see alignment E=9.4e-111

Best Hits

Predicted SEED Role

"Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)" in subsystem Arginine and Ornithine Degradation or Proline, 4-hydroxyproline uptake and utilization or Respiratory dehydrogenases 1 (EC 1.5.1.12, EC 1.5.99.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.5.1.12 or 1.5.99.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1252 amino acids)

>MPMX19_05932 Bifunctional protein PutA (Azospirillum sp. SherDot2)
MNQMIDPSAAPASEPSLSSGALTTGGAPFAAFAPVVRPASPLRQAITAAYRRPEPDCVAW
LVEQAALPAEVTAAAAQTARTLISALRAKPQGRGVEGLIHEYSLSSQEGVALMCLAEALL
RIPDRATRDALIRDKIAGGDWRAHLGNSPSLFVNAATWGLLVTGKVTGVLGTGFGGEQAL
SSALTKLILRGGEPLIRRGVDFAMRMMGEQFVTGQTIDEALSNSRKMEAEGFRYSYDMLG
EAATTAADADRYYADYETAIHAIGKASAGRGIYDGPGISIKLSALHPRYSRAQADRVMAE
LLPRVTELARLARSYDIGLNIDAEEADRLELSLDLLEALCFDPDLTGWNGIGFVVQAYGK
RCPYVIDFVVDLARRSGHRLMVRLVKGAYWDSEIKRAQVDGLEDFPVYTRKLHTDVSYVA
CARRLLGAPDAVFPQFATHNAQTLATIYQMAAQLNGAFKVGQYEFQCLHGMGEPLYKEVV
GPLKRPCRVYAPVGTHETLLAYLVRRLLENGANSSFVNRIADKSVSIDDLVADPVALARA
ALPVGARNPLISLPADLYGAERANSAGLDLSNETVLADLSAALRDSATVAWTAAPLLADG
ERHGERQGKAQPVLNPADHRDVVGRCIEAGPTDIADAFLFAEAAAPVWAATPPAERAACL
FRAADAMQARLPTLLGLIIREAGKSTANAIAEVREAIDFLRYYGARVRDGFANDTHLPLG
PVVCISPWNFPLAIFSGQVAAALAAGNPVLAKPAEETPLVAAEAVRLLHAAGVPAGAVQL
LPGAGEVGAALVGHAGTRAVMFTGSTEVARLIQRQLAGRLSPQGTPIPLIAETGGQNAMI
VDSSALAEQVVGDVIASAFDSAGQRCSALRILCLQEDIADRTLTMLKGAMRELRIGSPDR
LAVDVGPVITAEARDGIARHIEAMRAKGRRVESLPLPAETADGTFVAPTIVEIDGIADLE
REVFGPVLHVLRFHRDELDRLVDAINGTGYGLTFGLHTRIDATIDRVTSRIEAGNLYVNR
NTIGAVVGVQPFGGHGLSGTGPKAGGPLYLSRLLSVRPALDLGMRGDDAVRAPAHALADW
LADQGKAEIATDIRSLAKRSPVGGSVELAGPVGESNVYSLIPRGRILLLPQTEDGLYRLL
GAALAAGNEVVVDGDGAVTAGLKGLPAELDSRIRVSANWTGFGPLASALVEGDSARLLAA
SRRIAELPGPLVLTQGVPAGGAGVEIAWLMNERSLSVNTTAAGGNASLVAMS