Protein Info for MPMX19_05694 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 50 to 69 (20 residues), see Phobius details amino acids 81 to 101 (21 residues), see Phobius details amino acids 107 to 125 (19 residues), see Phobius details amino acids 133 to 153 (21 residues), see Phobius details amino acids 159 to 178 (20 residues), see Phobius details amino acids 191 to 209 (19 residues), see Phobius details amino acids 221 to 242 (22 residues), see Phobius details amino acids 251 to 271 (21 residues), see Phobius details amino acids 277 to 295 (19 residues), see Phobius details PF00892: EamA" amino acids 159 to 293 (135 residues), 62 bits, see alignment E=3.6e-21

Best Hits

KEGG orthology group: None (inferred from 60% identity to pmy:Pmen_1087)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (300 amino acids)

>MPMX19_05694 hypothetical protein (Azospirillum sp. SherDot2)
MVASDKTGAVPAPAVPTAGRAALLTLLAMLAFAANSILCRLALTQTATDPAGFTLVRIAS
GAASLWLIARATGHAKAGAGNWRGAAALLAYAAAFSFAYLTMTAGTGALLLFGAVQATMI
LVGLYRGERLVPLQWGGLALALGGLALLLAPGLSAPDPLGALLMVVAGAAWGIYSLLGRA
SRDPIATTAGNFLRAAPMAAVLALLAGPLSGGGLRWDQGGLVYAVLSGALASGVGYSIWY
AALPALTAARAASVQLSVPVITALVAVLALGERITPVLAVSSVAVLGGIALVILGKSRRG