Protein Info for MPMX19_05639 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1050 PF16841: CBM60" amino acids 13 to 102 (90 residues), 51.3 bits, see alignment E=2.1e-17 amino acids 154 to 239 (86 residues), 56.1 bits, see alignment E=6.3e-19 amino acids 294 to 377 (84 residues), 46.1 bits, see alignment E=8.3e-16 PF13229: Beta_helix" amino acids 688 to 779 (92 residues), 30.8 bits, see alignment E=3.2e-11 PF05048: NosD" amino acids 690 to 780 (91 residues), 28.8 bits, see alignment E=1.3e-10

Best Hits

KEGG orthology group: None (inferred from 90% identity to azl:AZL_d02400)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1050 amino acids)

>MPMX19_05639 hypothetical protein (Azospirillum sp. SherDot2)
MATTNTDGTIQVTFAVNAWGAAAGGKWPHFQLLLDGASIGEATVSSATQSRYVFTATVPA
DKAHALQLVYDNDDTVNGEDRNLFVKSFEVNGKTILSIDPSVKYDTGKIDGLNVISGQTE
MYWPGALNVPLPATLFPSAATVPDAETAATMTTTIKVKAYGVSAAGQAPHFKLLVDDQVV
GDAWVNATSATDYTFTAKVDPNEAHKIQIWYDNDATVNGVDRNLFVKSINIDGQTIASTS
DMASYDKGPVDGKFVVAGQEGLYWGGALTFGVPEEYFGGAYVPPPPPPPSKAVDIVVNAY
GTSAGGQAAHFKLLVDGQVIGDAKAAATTTGYKFTADIDPTKAHTVQVWYDNDATVNGVD
RNLFVKSVSINGHTVAVTDSIVTYDKGAVDGKDVVKGQEGLYWGGALNIKAGTDLFSDTP
ATQTPVPTAPTKPAFYVAANGKDTWSGKLAAPNADGTDGPFASLEKAQAAMRANSTIDTT
YVREGTYHLTKTLELTSLDNGHSFQNYPGEKPVLSGGEVVKSFTSEGNGLYSAKLGTASN
LDLIVGDVRQHLAEKFAYDAADVTSGWHFADAASGGPSGWSIRSHGTDVTAADIQPGTLI
QIMDAERLGDTLGTIASFNASTRTIMLKNGASLPFAEGTTYKLLNNAAYVDQAGEFAWRT
SDGKLLYKAASSGFVSSGVEVPRLDTLIKLNGASNVTIDGLTFKNTTTGGDALLLTKSSG
NHISDNSFLNVGTAIKLTAASSNNDIAHNTLNHLAESGIEMDGRSNGNSIYGNSISNIGE
VRKAVSGIIGTGVDNNLISNNDIDHSARYGISFKDYGGTTNTVNHNNIIQYNNISYTGLE
TADGGAIEILGRSSVDTGMIIQGNRIEHANGLATSNQDTWMFGQKGFGIYLDDMAGGITV
RDNFIKDADWASVQIHGGDNNVVTNNFSVIASNKEDFIRIEWQPVHGTAGDPHNNTITKN
VVMGTLPLDDYIELLSANDFVIDNNLVYNVPKYGDHDVIGKPMFTNAYWGDYSLLPTSPA
FAMGIHDLAWAKMGADGVAAVGLEHFWDGV