Protein Info for MPMX19_05626 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 487 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details transmembrane" amino acids 45 to 67 (23 residues), see Phobius details amino acids 90 to 110 (21 residues), see Phobius details amino acids 120 to 140 (21 residues), see Phobius details amino acids 149 to 168 (20 residues), see Phobius details amino acids 174 to 194 (21 residues), see Phobius details amino acids 215 to 239 (25 residues), see Phobius details amino acids 260 to 281 (22 residues), see Phobius details amino acids 293 to 316 (24 residues), see Phobius details amino acids 328 to 348 (21 residues), see Phobius details amino acids 360 to 381 (22 residues), see Phobius details amino acids 387 to 406 (20 residues), see Phobius details amino acids 418 to 441 (24 residues), see Phobius details amino acids 450 to 474 (25 residues), see Phobius details PF01943: Polysacc_synt" amino acids 8 to 277 (270 residues), 112.4 bits, see alignment E=2.7e-36 PF13440: Polysacc_synt_3" amino acids 33 to 328 (296 residues), 46.3 bits, see alignment E=3.5e-16

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_d02540)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (487 amino acids)

>MPMX19_05626 hypothetical protein (Azospirillum sp. SherDot2)
MSAGHRIFRNIRALAAAKTATMASGLVTAAWTARVLGPDSFGVLGFGTSLMAYAALFVNM
GLSTYAIREIARNREQDDHRERAAELSEHVLTLRTVLALVVGVLYAAFVLSLDKPMEVKA
VLLVQAVQLLGNALVLDFVYQATEKMGVIATREIGTSIGSMLLVFLLVRGPEDAITAAAI
TGGSITVNALVMIGRFRRDFGHLRPRVDLKVWREILTAATPMAVGVFAWAIFTHLDVVML
GFLAPHTEVGWYSAAVKIQTLANLVGNIVMNAFLPQLAAAYGELGPMRDRMRAYAGVMLA
VGGLVIAGGFALAPSILGTLFGDAYAPATLALRLLMLASAVVYANMILGNPLLVWHRQTG
YMVAMLSGGALNALLNIWWIPRYGIEGAAMATFTAELAATVAIAWIHRQTVGELYGGITA
RALLCAGAAIAAALALDSFAAPLFDRLPALVHFVAGSVAMIAVYAAMAVLTGLVHLKRLR
RLTSATA