Protein Info for MPMX19_05491 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 796 signal peptide" amino acids 1 to 45 (45 residues), see Phobius details transmembrane" amino acids 137 to 159 (23 residues), see Phobius details amino acids 190 to 214 (25 residues), see Phobius details amino acids 226 to 247 (22 residues), see Phobius details amino acids 268 to 286 (19 residues), see Phobius details amino acids 296 to 316 (21 residues), see Phobius details amino acids 344 to 366 (23 residues), see Phobius details amino acids 375 to 399 (25 residues), see Phobius details amino acids 443 to 462 (20 residues), see Phobius details amino acids 473 to 490 (18 residues), see Phobius details amino acids 528 to 547 (20 residues), see Phobius details amino acids 553 to 575 (23 residues), see Phobius details PF00924: MS_channel_2nd" amino acids 573 to 638 (66 residues), 56.7 bits, see alignment E=2.1e-19 PF21082: MS_channel_3rd" amino acids 648 to 731 (84 residues), 35 bits, see alignment E=1.6e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (796 amino acids)

>MPMX19_05491 hypothetical protein (Azospirillum sp. SherDot2)
MPTPPLPARAFSLRLRWPVRLRAATLILLLGLLSLGLAFAEASAQTAAQPPAQTTAPPPA
ATPAAPAPTGTAPPTPAPPSAAASAADGMMMLMLSQGRDRMAGFRGKLAKRLHATPAIPS
AIVATLKAQSPTGEPAYFLQIIGLTFALMAAGHGVQHLVYQRPVARRLLPPPAEPRPGGS
ILAARFPRLVAHALLTLVGMLLATLIGFGLATALVPEPTPMTEKTVILAGAGYLLVWAIA
LFWRLVMPPGASTDAGVAPAVRRLRRDLTASGALGVALMIGTIWLEALGMPYDPHAVLVA
LFGLLTVLATVGALYINRQTVERAFLAGRPAATVAPLERLTLRLWFPAVLVYFAYALATL
INRLILGWPTELPLLLGAYAVAAAILAVYASVTYATEWLFHHRRTLWRPLEESREGAPDG
DGLFPDTPRPATIDSYEALARRVAGILAAAAGVAVTLSVWNIPRMHGDAADKLISIMTVC
LIGYVAYHGVRIWIDRRIAEEGPTPGVIPGDEGSGHGSASRLATLLPLVRNFILLSILGA
ILLSVLMDLGVNIAPLFAGAGVAGIAIGFGAQTLIRDIFSGAFFLIDDAFRKGEYIEIGA
IRGTVEKISVRSMQLRHHRGPLHTVPFGEIHQLTNYSRDWVIMKLPLRITYDTDVEKVRK
HIKQLGQMLLDDPDLGPKFLQPLKSQGVIQMEDSAMILRVKFMTRPGDQWEIRKRVYQEL
HALFRREGIRFANREVTVRFASEATATSATGDPLAGDPVTMQIGEEERTLAAGAVLHALG
EDVPDVKPAAGRRLKP