Protein Info for MPMX19_05283 in Azospirillum sp. SherDot2

Annotation: C4-dicarboxylic acid transporter DauA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 495 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 48 to 82 (35 residues), see Phobius details amino acids 90 to 109 (20 residues), see Phobius details amino acids 121 to 138 (18 residues), see Phobius details amino acids 144 to 163 (20 residues), see Phobius details amino acids 170 to 189 (20 residues), see Phobius details amino acids 222 to 243 (22 residues), see Phobius details amino acids 263 to 283 (21 residues), see Phobius details amino acids 293 to 312 (20 residues), see Phobius details amino acids 320 to 340 (21 residues), see Phobius details amino acids 352 to 383 (32 residues), see Phobius details PF00916: Sulfate_transp" amino acids 17 to 147 (131 residues), 93.3 bits, see alignment E=1.4e-30 amino acids 163 to 345 (183 residues), 100.8 bits, see alignment E=7.3e-33 PF01740: STAS" amino acids 398 to 485 (88 residues), 40.1 bits, see alignment E=2.8e-14

Best Hits

Swiss-Prot: 60% identical to YBAR_BACSU: Putative sulfate transporter YbaR (ybaR) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 76% identity to smk:Sinme_6552)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (495 amino acids)

>MPMX19_05283 C4-dicarboxylic acid transporter DauA (Azospirillum sp. SherDot2)
MTIDLQRLRQEWFGNTRGDLLSGLVVALALIPEAIAFSIIAGVDPKIGLYASFAIAMTIA
IVGGRPGMISAATAATAVLMVTLVKEHGLQYLLAATVLAGLLQVGAGFLRLGALMRFVSK
SVMTGFVNALAILIFLAQLPELVGVPAVTYALVAAGLVIIYLLPRLTRAVPSALVSILVL
TAVTIGFGIDVRTVGDMGELPSTPPVFLLPDIPLTLETLRTILPYSAGIAVVGLLESLMT
AAIVDDMTETGSDKNRECVGQGIANMVSGFLGGMAGCAMIGQSVINVKSGGRGRLSTFCA
GLFLLFLIVVLGDWVKRIPMAALVAVMIMVSVGTFSWQSLKSLVTHPGSSSAVMLATIAG
VVFTHNLAIGVLIGVLLSGIFFAGKVARMFRVTSTLSEDGRTRTYRVEGQLFFASADDFS
AAFDVREALDMAVIDVSGAHIWDISSVAALDGVVLKFRRAGTEVRLAGLNAASETIVDRL
AIHDKPEAGDRAPAH