Protein Info for MPMX19_05256 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 697 transmembrane" amino acids 35 to 53 (19 residues), see Phobius details amino acids 59 to 79 (21 residues), see Phobius details amino acids 90 to 109 (20 residues), see Phobius details amino acids 121 to 138 (18 residues), see Phobius details amino acids 145 to 164 (20 residues), see Phobius details amino acids 190 to 211 (22 residues), see Phobius details amino acids 277 to 302 (26 residues), see Phobius details amino acids 314 to 333 (20 residues), see Phobius details amino acids 354 to 375 (22 residues), see Phobius details amino acids 381 to 402 (22 residues), see Phobius details amino acids 409 to 427 (19 residues), see Phobius details amino acids 433 to 450 (18 residues), see Phobius details amino acids 470 to 494 (25 residues), see Phobius details amino acids 506 to 525 (20 residues), see Phobius details amino acids 532 to 552 (21 residues), see Phobius details amino acids 556 to 577 (22 residues), see Phobius details amino acids 588 to 608 (21 residues), see Phobius details amino acids 620 to 645 (26 residues), see Phobius details amino acids 655 to 684 (30 residues), see Phobius details TIGR02123: TRAP transporter, 4TM/12TM fusion protein" amino acids 34 to 688 (655 residues), 717.4 bits, see alignment E=8.8e-220 PF06808: DctM" amino acids 131 to 615 (485 residues), 261.1 bits, see alignment E=8.7e-82

Best Hits

KEGG orthology group: None (inferred from 95% identity to azl:AZL_c02230)

Predicted SEED Role

"TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (697 amino acids)

>MPMX19_05256 hypothetical protein (Azospirillum sp. SherDot2)
MVSANKNQADSEIRQAIDRENPATVAAFEGFDGRAVFVIAVAFSAFQIWTAAFNPVSTMV
VRAVHVGFLLLMTFTLFGFRQTAERRRVPWYDWLLGLTAFGVGLYHYVFEVDLIQRAGDP
NTTDLIVGTIAVALVFEAARRIMGLALPIMCGVFIPYALFGRHLPFGLAHRGYDLDQVID
NLYLSTEGLYGTPTFVSASYIFLFILFGAFLERAGMIKLFNDVSLGLVGHAKGGPAKVAV
ISSGLMGTINGSGVANVLTTGQFTIPLMMRFGYRPAFAGAVEATASMGGQLMPPVMGAAA
FIMAETIGVPYSEVAIAAAIPAILYFGSAFWMVHLEAGMRNLVGLPKDQCPSALRAVIEG
WYLILPLAALIYLLFSGFTPLFAGVIGIAATAALILGTTIVGTIGPMALRVAFWVAVGMV
AAGLWKLGFRTEHLAFTMVVLLIVPCLLFKGGRQTLVLVVNSIADGAKNAVGVGVACALV
GVLIGMMTLTGLASSFASTIVDWSGGNLLAALVLTMIACIVLGTGLPTTANYIITASIAA
PALLTMGVPLMVSHMFVFYFGIMADLTPPVALAALAASSICKADHMEIGWIATRVAMAGY
VVPFMAVYDPALVLQGGSWLAVAYVFVKACVAIALWGAATIGFFWTPLSLVARLYAAAAS
FLFIVALPLTDEAAFVMTVLFLLWQHRRRSVPTAAAA