Protein Info for MPMX19_05203 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 303 transmembrane" amino acids 56 to 73 (18 residues), see Phobius details amino acids 105 to 129 (25 residues), see Phobius details amino acids 145 to 185 (41 residues), see Phobius details amino acids 206 to 229 (24 residues), see Phobius details amino acids 236 to 258 (23 residues), see Phobius details amino acids 269 to 291 (23 residues), see Phobius details PF00528: BPD_transp_1" amino acids 118 to 284 (167 residues), 55 bits, see alignment E=4.7e-19

Best Hits

KEGG orthology group: K02050, sulfonate/nitrate/taurine transport system permease protein (inferred from 96% identity to azl:AZL_a00780)

Predicted SEED Role

"Taurine transport system permease protein TauC" in subsystem Taurine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (303 amino acids)

>MPMX19_05203 hypothetical protein (Azospirillum sp. SherDot2)
MTDLSFSPRPLPPGGRREPPLRPEYERTVTATGPIGDVARPLSPWERLGNVTALRRLLVL
AAVAALWQAAAVWQNNPLMFPTFTDTAAALWDAIRRDTLLSMAWTSLAVLLKGYAVAVVL
AVLLTTVAVSTRIGNDLLSTLTSMFNPLPAIALLPIAMLWFGLGEISLIFVLVHAVLWPL
ALNTHAGFTSVSETLRMAGRNYGLGSFRYVVTLLIPAAFPAILTGLKVGWAFAWRTLIAA
ELVFGVSSGKGGLGWFIFQNRNELYIDKVFAGLVTVILIGLLVENVVFRWIEIHTVRKWG
MVR