Protein Info for MPMX19_05155 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 521 transmembrane" amino acids 13 to 36 (24 residues), see Phobius details amino acids 148 to 170 (23 residues), see Phobius details PF00672: HAMP" amino acids 169 to 218 (50 residues), 42.2 bits, see alignment 8.4e-15 PF00015: MCPsignal" amino acids 322 to 483 (162 residues), 112.1 bits, see alignment E=2.7e-36

Best Hits

KEGG orthology group: None (inferred from 82% identity to azl:AZL_a10230)

Predicted SEED Role

"Methyl-accepting chemotaxis protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (521 amino acids)

>MPMX19_05155 hypothetical protein (Azospirillum sp. SherDot2)
MFGFYRRNLTVRVLFPIAALFVALALAAMTGVAYMNMAVARNGLTERAQMIATALAGGAG
EALWNMDGNAASALLAALSADPDYVGSSIKDKDGKVFASHGATVSQSEAGIVGNAPVTRS
EGAKATEIGTLQVRLSTQRIQDDIRTTTAVIALAALLSVLVICGVLGAIVRTVTRPIAQM
TRVMSALAAGETNVDVPATGREDEVGKMAFAVQTFRENAIERRRLEAGQLRLREEAERQR
QHALASVAETFDRDVGRLLTAVNRTSSSMGLSVGEVAAGAGENATVSQTVAHTSEEVSGS
VQTVAAAVEELAASIREISIQAQSSQAESQGASRQVAATVDLMNRLVGDAGRIGDVLTLI
TSIAGQTNLLALNATIEAARAGEAGKGFAVVATEVKNLAGQTAKATEEISALIGAIQAST
GDAAGKIGDISRVMDQLNSISASIAAAVEQQNAATTEISRAVQQAAQGTERLRLNVHAVA
GSAQRNGTAAATLHGGIQELERSVHELQTQVDRFVGTLQAG