Protein Info for MPMX19_05090 in Azospirillum sp. SherDot2

Annotation: putative acyl--CoA ligase YhfT

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 499 transmembrane" amino acids 80 to 97 (18 residues), see Phobius details PF00501: AMP-binding" amino acids 24 to 351 (328 residues), 186.4 bits, see alignment E=7.8e-59 PF13193: AMP-binding_C" amino acids 401 to 476 (76 residues), 62.9 bits, see alignment E=4.6e-21

Best Hits

KEGG orthology group: None (inferred from 86% identity to azl:AZL_c03380)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (499 amino acids)

>MPMX19_05090 putative acyl--CoA ligase YhfT (Azospirillum sp. SherDot2)
MIPEQPSLTGGYLGEDSLVRPFALAAERTPDHPALILGEEALSYGALLEQVRRAGAGVAA
LRRDGAPPHVALSLGNRPELLALFFGIVAAGGIVGLLDPKWSAAQTAAAIETFRPDLHLT
TEIAATWIAAQPAGWTMPAVDPKRPFLVGFTSGTTGRPKAFIRNQGSWLATLEASRVEFG
IGTEDVILVPGPLVHGLGLYGAVEGLSAGATVRVQAKFDGTDAAAQLAECGVTTLVLVPT
MLVGILDAAERDGRPFPALRRVVCSGAKLAPAVHDRLAALCPDAAVLEYYGASELSFVSL
RSSREGAPADSVGRPFHGVELSLRDDDGRPVERGRPGTVWVRSGMLSDGYLGVTDGAGYR
ERNGWGTVGDYGWIDDGGWLRLVGRAGDMVITGGLNVYPAEVEAVLRAHPAVAEAVVFGL
PDPYWGDALSAVVWWRGSARASLADLRGWCHDRLEGYKAPRRVFAASDMPLTGSGKIARA
DVRERAKLGGPDGGLEVVA