Protein Info for MPMX19_05071 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 620 PF16841: CBM60" amino acids 9 to 93 (85 residues), 41.5 bits, see alignment E=2.3e-14 PF13229: Beta_helix" amino acids 257 to 428 (172 residues), 50.5 bits, see alignment E=2.8e-17 amino acids 350 to 541 (192 residues), 38.6 bits, see alignment E=1.3e-13 PF05048: NosD" amino acids 259 to 416 (158 residues), 35 bits, see alignment E=1.5e-12 amino acids 351 to 525 (175 residues), 32.3 bits, see alignment E=1.1e-11 TIGR03807: putative cofactor-binding repeat" amino acids 440 to 463 (24 residues), 17.2 bits, see alignment (E = 3.8e-07) TIGR03804: parallel beta-helix repeat" amino acids 446 to 489 (44 residues), 22.6 bits, see alignment 6.5e-09

Best Hits

KEGG orthology group: None (inferred from 77% identity to azl:AZL_d05130)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (620 amino acids)

>MPMX19_05071 hypothetical protein (Azospirillum sp. SherDot2)
MATTSGNSTITVSAKGTLDAHFNLLVDGKKIGEGTTDATAKDFVFKTDIVEGQGHKVQVQ
YDNDGIFHGTDRNLIVNEITINGKSVLPTSDHVTYDKGALDGHDVADGQAGMWWNGTLVV
DADKSYFPTSSVTPPTIPPVSEVPTTEPTPSTPAPTVPKPTDPGFYVATNGNDSWSGKLA
APNADGTDGPFASLQKAQAAMRADPNIDTTYIRGGDYHQNGMWLDGQDSGVHFVGYGSEK
AVIHGGSNATVSFGLGGAKNVTIEGLNFADGVVGGHYVYADNASGLTFANNAVKGGGYGI
TVQNSADSKVIGNQFDSTGAEAIFVKAGSNATVVSDNHITHPNAADRGDAGIWINGSSDV
QVTHNLVEDSPEKAIAVGSVQTDGSDATHRVTIANNKVVDANLESNDGGGIYLINRQQDL
TDHTVVNNEVTGTTATNPSGDVASWGIYLDDWTSGATVKGNIVHGNIGGVFLHGGWDNKV
TENVIADNSGAQIGLQQPVAWSGWQGHQMSGNDISGNVVDVRDGTAVHIYGPANVGNIHN
NFYSNLDASKDMFDVWPQVMSGGGKGDLAEWKAAGYDNGSVQLDPSFVNPGAHDFSLASD
SAVYGLGFDHIPTHDIGLLG