Protein Info for MPMX19_05017 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details transmembrane" amino acids 271 to 291 (21 residues), see Phobius details PF00497: SBP_bac_3" amino acids 43 to 256 (214 residues), 123 bits, see alignment E=1.3e-39 TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 301 to 460 (160 residues), 152.6 bits, see alignment E=4e-49 PF00990: GGDEF" amino acids 306 to 457 (152 residues), 144.5 bits, see alignment E=2.6e-46

Best Hits

KEGG orthology group: None (inferred from 54% identity to mgm:Mmc1_1733)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (488 amino acids)

>MPMX19_05017 hypothetical protein (Azospirillum sp. SherDot2)
MADSMSGRAVRRLLQCLAVLAVPVHLLIAATAYGAGSADGSVTYCADPDWAPYETITADG
RHQGIAADLLALVSERSGLALSPLPTRDWEDSLAAVRDGRCRFLSFLNRTPKREEWLAFT
EPLFVDPNVLVTRESHDFIADLAGLGGETMVLPKGTSTEERVRRDFPDLRIVVVDSEAEA
FAMVSHGKADMTLRSLTVAVFTIKTAGWFNLKVAGHLPGYENLLRIGVRRDEPELLAALD
RGVRTISAAERTAIANRHVAIQVQSPLDPWTLAKLLAIPAAVILTSLFWIVKLMRVNERL
RVQSRTDVLTGLANRSHLNDVCRAEMERAARYGRPFSIILIDLDHFKQVNDRYGHVFGDR
VLIEFAALARQALRGTDTVGRWGGEEFLILCPEAGPEAAFALAERLRRTIRGYDFSNGHR
QTGSFGVAGVRDGDSMDRLLIRADNALYRAKDEGRDRVVLDSDDSDGGGGEGDGRPGRAF
SRTACPAD