Protein Info for MPMX19_04911 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 674 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 611 to 630 (20 residues), see Phobius details PF05170: AsmA" amino acids 14 to 176 (163 residues), 84.3 bits, see alignment E=9.5e-28 amino acids 301 to 543 (243 residues), 89 bits, see alignment E=3.4e-29 PF13502: AsmA_2" amino acids 395 to 573 (179 residues), 77.7 bits, see alignment E=1e-25

Best Hits

KEGG orthology group: K07290, hypothetical protein (inferred from 80% identity to azl:AZL_c00380)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (674 amino acids)

>MPMX19_04911 hypothetical protein (Azospirillum sp. SherDot2)
MKAGAGSVFKWIGYGLLGLVGLVVVGVGAVVLLFDWNDARGFVARRASAALNREVAIDGD
LRVHLGNPIRIHLEGLRVANADWAQDRTMAEIKALDASLRPWPLLRGNWELPELKFQGPK
LILEKNDKGEANWTFGPPNAEKAVAKDAVTPDKRGDIPVIERLLIADGRIRYRDPTGDID
IDNTINTATGDNDSDTVQLNGKGNFAGKPFTLAVEGGSLLYLRDDPKPYPLKIDAAVGKT
KGRIEGSVAEPVKLEGVDLSVALSGNDLAEIFPILGIPTPKTRPYSISGHLSREGGLWTF
HGMNGKVGESDLAGDLSVDTNGERPMVKADLTSNRLAAQDLAGLIGASPRGSGDYPTRGN
GRVIPATPVNVEMLRNTDMDVRLRGKRVEAPFAPLQDLDMRVRLANGDLHFDPLSLGIGG
GRIAGTVQVDGSRKVPAMRTNLDIRAMKLSTFFSETSLAGQIGGTVAGRIQLAGSGKTVA
DLLGSSDGKIGVAVDGGRVTSLAVKGLKTNILETLGVVISGSKPMPFNCLVGNMAVQNGV
AQVEALVLDTPETLVTGKGRISLRNEALDLRIVGDSKSPQVFATHVPVLVGGTLGNPDIG
VDPTESAARGAAAVALGVLLTPLAGVLPFLDPGSEEQPQCGRLVQDARSPDKGTAASGKS
GNGRGDGKASGSAR