Protein Info for MPMX19_04910 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 591 transmembrane" amino acids 6 to 22 (17 residues), see Phobius details amino acids 28 to 45 (18 residues), see Phobius details amino acids 56 to 75 (20 residues), see Phobius details amino acids 94 to 122 (29 residues), see Phobius details amino acids 133 to 154 (22 residues), see Phobius details amino acids 174 to 198 (25 residues), see Phobius details amino acids 398 to 427 (30 residues), see Phobius details amino acids 445 to 458 (14 residues), see Phobius details amino acids 481 to 517 (37 residues), see Phobius details amino acids 527 to 546 (20 residues), see Phobius details amino acids 566 to 589 (24 residues), see Phobius details PF03600: CitMHS" amino acids 16 to 534 (519 residues), 243.2 bits, see alignment E=6.5e-76 amino acids 486 to 584 (99 residues), 39.1 bits, see alignment E=7.8e-14 PF02080: TrkA_C" amino acids 218 to 285 (68 residues), 38.9 bits, see alignment E=9.6e-14 amino acids 308 to 378 (71 residues), 39.1 bits, see alignment E=8.7e-14 PF00939: Na_sulph_symp" amino acids 369 to 588 (220 residues), 63.2 bits, see alignment E=3.6e-21

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_c00390)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (591 amino acids)

>MPMX19_04910 hypothetical protein (Azospirillum sp. SherDot2)
MTIDQMLSFGIIGAVIALLIWDRLRYDLVGMIALLASVAAGIVPAKEAFQGFSDDIVIIV
GSALVVSAAVGRSGVVEAAMRPLTARMSGVWTQVAVLAGAVTLLSAIVKNIGALAIFMPI
ALQVARRSGTPVSLLLMPMAFGSLLGGLMTLVGTSPNIIVSRVRAEMTGEPFHMFDFTPV
GLVIAVVGVAFLTVGYRLLPKGRAAGAGPAFNIDDYTAEARLPAGSQFVGRTVAELETFG
ENEVTVAAIVRENYRRYVPSGHWVLFAGDILVLEGDTTALGDLVKRAGLRMMHDKDQEGV
ENEDDIAVVEAVVEQRSAMIGHSIEEVNLRERFGANLVALSRRGRPIRQRLRRIRLQSGD
LVVLQCRQAAVSDTLAELGCLPLAERNLAIGRTPKRAAAVAVLGLTVTLVATGLVPVAIA
FFGAAVAMTALKVVSLRDAYEAIEWPILVLLGSLIPVSETLRTTGGTELIAGFLSEMSQG
LPPVGALAMIMVAAMAVTPFLNNAATVLVMAPIGASLATHLGLRPDAFLMAVAIGAGCDF
LTPIGHQCNTLVMGPGGYRFGDYWRLGLPLSIMVVVFGTTAIAVFWPLVPR