Protein Info for MPMX19_04797 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 457 transmembrane" amino acids 17 to 51 (35 residues), see Phobius details amino acids 57 to 79 (23 residues), see Phobius details amino acids 90 to 110 (21 residues), see Phobius details amino acids 116 to 137 (22 residues), see Phobius details amino acids 263 to 286 (24 residues), see Phobius details PF02397: Bac_transf" amino acids 258 to 451 (194 residues), 177.5 bits, see alignment E=9.8e-57

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (457 amino acids)

>MPMX19_04797 hypothetical protein (Azospirillum sp. SherDot2)
MVAAPLSSLSERRPRIVWAPLVLVLVDLLVLEAAVLCGVVMRSLLAIWLPIGIGAEVYSG
AMVAVACILAGYWLAGLYPGYGLTGVERLRLRTIVTSIGFGSLILFDYIAQNGQWSRGIL
LIAAGTCLVAGPVADALTRGVLVWRGVWGAPVAVFGPPEHRHRVIDRLNGRPDIGWIPVY
EADEPVAVDGASFAVFAVPSIEALDVETIDHLPYRGMILVLSGVVEWQNLWVSARDVGAC
MGLEMRRNLLVGLNMAIKRGVDLALVLTFGLCAVPIIAVFALLVRIVSPGPAFFLQWREG
QGGRPFRFIKLRTMRVDADTHPPPVPDGGDPAVSHWQRGMKRPDDPRIIPGLGHFMRRFS
IDELPQLLNVLRGEMSLVGPRPLPAYHIAALDPASCRLRRMVRPGLSGLWQVSGRSLSTL
DEQQALDSYYVRNWSIWLDFHILARSVAIVLTGRGAW