Protein Info for MPMX19_04785 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 406 PF13579: Glyco_trans_4_4" amino acids 14 to 199 (186 residues), 43.8 bits, see alignment E=8.9e-15 PF13439: Glyco_transf_4" amino acids 53 to 199 (147 residues), 36.3 bits, see alignment E=1.5e-12 PF13692: Glyco_trans_1_4" amino acids 224 to 355 (132 residues), 80.9 bits, see alignment E=3e-26 PF00534: Glycos_transf_1" amino acids 224 to 363 (140 residues), 73.5 bits, see alignment E=3.9e-24

Best Hits

KEGG orthology group: None (inferred from 44% identity to mno:Mnod_4364)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (406 amino acids)

>MPMX19_04785 hypothetical protein (Azospirillum sp. SherDot2)
MRVLIVHERYRQRGGEDVVVEGETELLARYGVETDLLTADNAAIDGGGSLGLAVGALWSR
SGYSSTRAAIARFRPDIVHVHNSFPLLSASVFDAARSMGVPVVQTLHNYRLLCPNALLLR
DGAPCEACVGQTSKWSGLRHGCYRGSRAATAAVAGYALSQRLGGVHRRGVAVYHALTPFA
AGLFARGGIPADRIAVRPPLLDYPSARGGAAVGHPAGGPPRAGALFVGRLSPEKGLDTLL
SAWRGVDAPLDIIGDGPDMDRLRGMAPPQVRFLGHKPAAIAAQAMARAALLVFPSLCYEN
FPLVVAEAMAAGLPALCAGGGAAADVLGEAGDPRLFARPGDAEDWRRKAVALLADPDALA
SLGAGERDSWERRLAPDAAFAATLALYRRALRGLSLSPVPGQDGRG