Protein Info for MPMX19_04713 in Azospirillum sp. SherDot2

Annotation: putative MFS-type transporter YcaD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 424 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 25 to 25 (1 residues), see Phobius details amino acids 39 to 58 (20 residues), see Phobius details amino acids 70 to 90 (21 residues), see Phobius details amino acids 96 to 118 (23 residues), see Phobius details amino acids 130 to 150 (21 residues), see Phobius details amino acids 157 to 177 (21 residues), see Phobius details amino acids 199 to 219 (21 residues), see Phobius details amino acids 231 to 251 (21 residues), see Phobius details amino acids 263 to 282 (20 residues), see Phobius details amino acids 288 to 308 (21 residues), see Phobius details amino acids 328 to 349 (22 residues), see Phobius details amino acids 355 to 374 (20 residues), see Phobius details PF07690: MFS_1" amino acids 10 to 312 (303 residues), 70.7 bits, see alignment E=5.6e-24

Best Hits

KEGG orthology group: None (inferred from 87% identity to azl:AZL_c01740)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (424 amino acids)

>MPMX19_04713 putative MFS-type transporter YcaD (Azospirillum sp. SherDot2)
MSLIQPIVPLLLAVFLMMGGTGALTTIVSVRLDAAGAPPILLGALTAAYYLGVTVGSTQA
FRLVGQVGHIRAFSASATVLVAATLGHTLGSDPATWIALRLVEGCCMAGLFVCIESWLNQ
SATSATRGQILALYMIALYGAQGAGQYLMVIDDPHGFKQFVIVSILVSLALVPVALSRTA
PPLLQKLESVRIGHLYRASPLGFAGTVISGLVVGAFYGLGPVYVRHLGYDLGQSATFISA
AIIGGMLLQWPFGKLSDLIDRRLVLVGLFAALAVISIGMTMLPESGFGPLLAGISLFGGI
IFAIYPICVSHTNDFLTPAEMVPASGGMVLGFSIGAIAGPFLASLVMAVFEQDGLFLFAA
LVAIVALAFALWRMTVRPPVPLDQRLPFLPQAPIPGPLDGVTPGVEKSGNGIGEEEPEAE
PSRL