Protein Info for MPMX19_04597 in Azospirillum sp. SherDot2

Annotation: Adaptive-response sensory-kinase SasA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 546 transmembrane" amino acids 16 to 38 (23 residues), see Phobius details amino acids 256 to 280 (25 residues), see Phobius details PF00512: HisKA" amino acids 335 to 399 (65 residues), 64.9 bits, see alignment E=8.1e-22 PF02518: HATPase_c" amino acids 438 to 539 (102 residues), 80.2 bits, see alignment E=2.3e-26

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_c03600)

Predicted SEED Role

"Two-component response regulator CreC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (546 amino acids)

>MPMX19_04597 Adaptive-response sensory-kinase SasA (Azospirillum sp. SherDot2)
MKSPFGRSPSGRRPSIATVLLVMTVAALVLPLSGLWILRLYESALIRQTESELIAQAGVV
AAFYRDAWRRAGGRAEDLGPPVDPAWTRPPGFDPPWTPRFASLDLAEDPILPPAPDPVPA
AASDPSAAIAGSTLGPILRDAQRITLAGMRVTDRQGVVVASTGEEMGLSLERQDEVRRAL
TGEAASVLRERTSHDRPGQERIGYRSGSDSPAVPDRSRSVRVFTAQPVLDDGRVVGVVVV
SRTPRSIADTLYGKRWHLAGLAVLLLVSVGVLARLGTVAIARPLRAVTELAKRTADGERG
VMVPLPRPVVREVAELSDALTRMARTLEERADYIRDFAAHVSHEFKTPLTTIRGTVELLR
DHMDSMPPEDRDRFLANMDAEAGRLSRLVRRLLELARADVMTVTDDAVTDAVPVAARLAE
RHGADTSLPASLPVAMGQESLESVLANLIENARHHAGADARVTVTLRAEGGRAILRVADD
GPGISPANADRVFVPFFTTARDRSGTGLGLTIARGLVDAHGGRIALLPSERGALFEVALR
RVLPLR