Protein Info for MPMX19_04582 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 809 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 31 to 49 (19 residues), see Phobius details PF00015: MCPsignal" amino acids 200 to 360 (161 residues), 100.1 bits, see alignment E=2e-32 TIGR03407: urea ABC transporter, urea binding protein" amino acids 443 to 800 (358 residues), 501 bits, see alignment E=8.7e-155 PF13433: Peripla_BP_5" amino acids 443 to 802 (360 residues), 419.6 bits, see alignment E=1.7e-129 PF13458: Peripla_BP_6" amino acids 443 to 784 (342 residues), 273.4 bits, see alignment E=6.2e-85

Best Hits

Predicted SEED Role

"Methyl-accepting chemotaxis protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (809 amino acids)

>MPMX19_04582 hypothetical protein (Azospirillum sp. SherDot2)
MTPAKSASTACAVVALLSAMAVPLTGSTGVATAGLVVSAALAAAAATFAHRRDAALGSLG
TRAAALSGSGGGTGGGAGGDPVRELADALDRIAAAAELRDAREAEREAERKATEERAARL
EALTRAFESKVGRLVQTVSSAAAEMTGTATAMSETAGRSNRLSAAMSQSSAQASMNVQTV
ATATEELSASIQEIGRQVASSAAIAGKAVADTRRTDTVVQSLADSAGRIGQVIGLIQGIA
GQTNLLALNATIEAARAGEAGKGFAVVASEVKTLANQTARATEDIATQVGAIQSATAEAV
AAIRSIAGTIAEINEIAAAIAAAVEQQGAATGEIARNVQEAARGTESVASNIAGVSEAAS
DTGVAAGQVLGVASQVAGHADELSREVNNFLAEVSLQAALRRRASVAGRMAVATVRRTQG
LAPGAPATAAVNRSGIAVTDEAVKVGILHSVTGTMALSEGGSIQAEMLAIQQINEAGGVL
GRRIEIAQEDGASDWPIFAARADKLLAQDRVAAIFGCWTSASRKEVLPVLEKHDGLLYYP
TFYEGLEQSKHVIYTGQEATQQILAGLDWVMREKGAKSFFLIGSDYIWPRASNAIARRHI
EAKGCRVVGEEYAELGDTRFETIVARIKAAKPDVIYAIVVGGSNVAFYKQLKAAGIELDR
QILMTNSVTEDEMMGIGGENIAGAFTCAKYFQSLELPANRAFVAAFKAMWGADSVIGDVT
HNAWLGPWLWKLAVEKAGSFDVARVVAASPGIEFAGAPAGPLRIHENHHLWTRTRIGRAR
RDGQFDVVFETRDLIEPNPFPDGFRELAA