Protein Info for MPMX19_04532 in Azospirillum sp. SherDot2

Annotation: p-hydroxybenzoic acid efflux pump subunit AaeB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 712 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 39 to 61 (23 residues), see Phobius details amino acids 73 to 91 (19 residues), see Phobius details amino acids 98 to 117 (20 residues), see Phobius details amino acids 124 to 144 (21 residues), see Phobius details amino acids 155 to 174 (20 residues), see Phobius details amino acids 396 to 414 (19 residues), see Phobius details amino acids 420 to 437 (18 residues), see Phobius details amino acids 444 to 466 (23 residues), see Phobius details amino acids 472 to 489 (18 residues), see Phobius details amino acids 497 to 517 (21 residues), see Phobius details amino acids 529 to 557 (29 residues), see Phobius details amino acids 688 to 708 (21 residues), see Phobius details PF04632: FUSC" amino acids 26 to 701 (676 residues), 556.7 bits, see alignment E=1.8e-170 PF06081: ArAE_1" amino acids 31 to 169 (139 residues), 25.4 bits, see alignment E=2.7e-09 PF13515: FUSC_2" amino acids 38 to 169 (132 residues), 52.3 bits, see alignment E=1.3e-17 PF11744: ALMT" amino acids 52 to 175 (124 residues), 27.3 bits, see alignment E=3.7e-10

Best Hits

KEGG orthology group: None (inferred from 70% identity to rru:Rru_A1952)

Predicted SEED Role

"COG1289: Predicted membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (712 amino acids)

>MPMX19_04532 p-hydroxybenzoic acid efflux pump subunit AaeB (Azospirillum sp. SherDot2)
MRTHHASNRLLTATGIALLRTDADALLFSAKSFAAAMLAYYIALRAGVPKPSWAIVTVYI
VSQTSAGASLSRGVYRFAGTIVGAAATVAIIPCFVNDPLVCSVVLAGWIGLCLYLSLLDR
TARAYAFVLSGYTASLIGFPGVFNPAAIFDTASVRVQEISIGILCAVLVHRFVLPKRMTG
QFTAKLSATLRDARRLAGDALHGSSGPEIRRDRDRLAGDLLALQGLAGHLPYDPVPVTPS
RETLHLIHDRLARLLPLATEVGDRIHALRDGDRSLPNELDNELAALLDEAGHWLAAADAA
GRDAVAIRLIDRARTLRTRIAAEAATAGDRLAANLAGHLAEMIGLLHECDRLGRIVGRSS
ARTAIAATMPPDAAAHRRAGHATGYVYHRDPWMAARSALGAVAGIVIGCAFWIWSAWPEG
GLAVSILGVCCALFGNVDTPAPNVVKYMTGSLVGVAVSLVYGFAILPRVTDFAGLAAVLA
PAFLVAGSLQARPPTTYMALGITLTIPILSGLGASYAGDFAGSLNSVVALFAATGFAVVS
MSLFQTIPVDAAIGRLLRLNRRDVRRRALGGAPDESLWTSLMIDRTALLLPRLRLSGASH
PDVLDDTLHHLRVGHAAGRFHRAIRHLDASDGASDGEIAYDGFELLTAIALRFGPGYRAG
PSDATALHRRIEALTARIAESPIADRALLLDLLIDLRFALGLGGAVAWENDR