Protein Info for MPMX19_04524 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 588 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 81 to 103 (23 residues), see Phobius details amino acids 115 to 136 (22 residues), see Phobius details amino acids 157 to 180 (24 residues), see Phobius details amino acids 216 to 241 (26 residues), see Phobius details amino acids 266 to 286 (21 residues), see Phobius details amino acids 316 to 338 (23 residues), see Phobius details amino acids 378 to 399 (22 residues), see Phobius details amino acids 409 to 433 (25 residues), see Phobius details amino acids 440 to 460 (21 residues), see Phobius details amino acids 489 to 513 (25 residues), see Phobius details amino acids 519 to 522 (4 residues), see Phobius details amino acids 543 to 568 (26 residues), see Phobius details PF00528: BPD_transp_1" amino acids 95 to 279 (185 residues), 43.5 bits, see alignment E=1.5e-15 amino acids 413 to 564 (152 residues), 36.3 bits, see alignment E=2.5e-13

Best Hits

KEGG orthology group: K02011, iron(III) transport system permease protein (inferred from 65% identity to bbr:BB2070)

Predicted SEED Role

"Ferric iron ABC transporter, permease protein" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (588 amino acids)

>MPMX19_04524 hypothetical protein (Azospirillum sp. SherDot2)
MGVISTSSRDAESRPVMARVPLVKAAVLGAVILLLALLVVQPFGWVLFNSLHDDATGAWT
LNNYARVVQSAELVEPLVNSLILAAATALIAVGIGVPLAWLVSRTDLPFRRTIRVLTLTA
FVTPSFIGATGWILLAAPNSGWLNTAWRWLAGEGAGAPLNIYSMAGAIFVCGIYTVPYSF
TMVSSALDEMAVELEDAATTLGCGVLRTMVSITIPLAAPAVIASFILSFIQGLTLFGVPA
FLLTPTGIPVVTTKLAEFYQLFPPEIYLAAAYCMPLLLVTGALFWMRRRYLGRKQYVTIS
GKTRAGRQIRLGGWRWPALFLALLVPLVSVFLPYAALLTVSLTRAWGQGLSWENLSLYWY
WWAIFGNSETHTAIVNSLVYSTLGATLCVALGTLVAYIVERRLMVGASLLGAVATVPIVI
PGIVLSVGFFAAYTRAPLNLYGTPLLLIAAFAATFLPIAYSHGGSILKGIGPELERAARS
LGAGEARTFLSITLPLMGGGLVSGWFLVFIPIIRELSVAVFLITPKTNVMTTLIYNAKDG
GNYEAVCAMSVLLLLITLFLVAVARPLAGLTGARRTSRKTATAAGVPS