Protein Info for MPMX19_04519 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 PF22691: Thiolase_C_1" amino acids 245 to 388 (144 residues), 183.6 bits, see alignment E=8.8e-59

Best Hits

KEGG orthology group: None (inferred from 78% identity to bbr:BB2065)

Predicted SEED Role

"Acetyl-CoA acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (389 amino acids)

>MPMX19_04519 hypothetical protein (Azospirillum sp. SherDot2)
MKQLSGKTAIVGAYESPRRDAPRVHPFALQMECILGALDDSGLTLTDVDGLCAASGDWAE
GGGTMDVIELAEYIGIQPTYVNSTDVGGCSYILQAGQAAAAIAAGLAEVVVISYAACPRW
WPLSTPSFDPFVFPAGPGQYEIPYAPTLISTYGLFARRHMDLYGTTPEQLAQVAVTFRGH
AAANPQARLRKPITVEDVLASPTIASPLHRLDCCVVTDGGGALVMTSRERARDLKRRPVY
LAGYGAAVARTQNSQIPDDLSTPAALSGPRAFAMAGMTPADIDVAQIYDAFTITPMLALE
DLGFCGRGESGPFVAAGNLAADGGSLPTNTDGGGLSSNHPGKRGIFTLIESVRQLRGDAP
GIQVPDAKVALAHGLGGTFCSAATAILAV