Protein Info for MPMX19_04505 in Azospirillum sp. SherDot2

Annotation: Aliphatic amidase regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 201 PF21332: AmiR_N" amino acids 12 to 121 (110 residues), 119.4 bits, see alignment E=7.7e-39 PF03861: ANTAR" amino acids 137 to 188 (52 residues), 52.8 bits, see alignment E=2.7e-18

Best Hits

KEGG orthology group: None (inferred from 36% identity to mfa:Mfla_0461)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (201 amino acids)

>MPMX19_04505 Aliphatic amidase regulator (Azospirillum sp. SherDot2)
MSINLLRDIRSFRVVVIHPQDAEAEELLRQLHRIGCQARSEWPPPKDRPSGVDLIFLDMT
QLLSGQGRLSWSTADDGPPIVAVLDYESPTVLKALVDYGVRGFVSKPIRAFGLLTTMFMA
HRAAEGERGMRKRLHKVEQRLDGIKKVSKAKAILIEQRRITEEEAYRFIRERAMARRTTI
EAVAAAIIDASEMLMAENPTR