Protein Info for MPMX19_04248 in Azospirillum sp. SherDot2

Annotation: Glucosamine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1868 TIGR02457: putative maltokinase" amino acids 22 to 520 (499 residues), 416.6 bits, see alignment E=2.3e-128 PF18085: Mak_N_cap" amino acids 35 to 99 (65 residues), 23.1 bits, see alignment (E = 3.7e-08) TIGR02402: malto-oligosyltrehalose trehalohydrolase" amino acids 560 to 1110 (551 residues), 710.6 bits, see alignment E=1.6e-217 PF00128: Alpha-amylase" amino acids 669 to 759 (91 residues), 46.2 bits, see alignment 1.2e-15 PF11941: DUF3459" amino acids 1054 to 1142 (89 residues), 57.1 bits, see alignment 5.7e-19 PF21226: MalQ_N" amino acids 1210 to 1304 (95 residues), 53.7 bits, see alignment 6.7e-18 TIGR00217: 4-alpha-glucanotransferase" amino acids 1282 to 1842 (561 residues), 462.4 bits, see alignment E=4.1e-142 PF02446: Glyco_hydro_77" amino acids 1325 to 1837 (513 residues), 403 bits, see alignment E=5.9e-124

Best Hits

KEGG orthology group: None (inferred from 88% identity to azl:AZL_a05620)

Predicted SEED Role

"Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)" in subsystem Trehalose Biosynthesis (EC 3.2.1.141)

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.141

Use Curated BLAST to search for 3.2.1.141

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1868 amino acids)

>MPMX19_04248 Glucosamine kinase (Azospirillum sp. SherDot2)
MPTAPQPHAQPTVLANPLESEILARLQDDLLPDHLLTRRWYAAKDAGRPVVRIVDALPLP
LAGGAQAQLCLLRVEPPGRDPQLYQLPLILDRGTGEDASAIAGSKDLQIPGRLRDGYADD
GVVRALLGAILKRDTVPGETALSAGLTAGHTRACEALSDRLRADAPLHRMTAEQSNTSIR
IGDTAILKGLRKLEPGIHPELEVSRFLTEVAQFPNTPALLGWVERANSSGSTTLCVMQEL
VPEAKDAWGHVTGHLNDRVARFEDSDAAKAGDADSVAFLRLLGQRTAELHRALATPGGGD
AFTPEPATAERLTEWAGGVRALAKRVLERLRAAGPTLDPAISAQANALAASEAAVMAQID
ALIPATADLSAMRLHGDYHLGQVLVSRGDVQIVDFEGEPMRPLAERRAKHCILRDVAGML
RSIAYAAAMARDAMPAGLDGPSRDARTAWLSWWEGAASAAFLDGYRSAIGDCPGFPRDAQ
AAPALLKLFLLEKALYEVGYELANRPGWVAIPLAGVTAIIRADAGPEIASRDRDRIAPVD
ERRRSHSMPFGAEVQADGSVRFSLWAPSVASVLLSLDDGGQPVAMENQGDGWFSLTTARA
QAGSRYRFVLPDGLAVPDPASRFQPDDVHGSSEVIDPGVHAWTDTAWTGRPWPETVLYEL
HVGTFTPGGTFLSAIERLDDLVELGVTAIELMPVADFPGSRNWGYDGVLPFAPDSAYGRP
EDLKVLVQEAHARGLMVFLDVVYNHFGPEGNYLHAFANSFFTERHKTPWGAAINVDGERS
GPVRDFFVHNALYWLEEFHLDGLRLDAVHAIIDDSDRHVLEELAERVHSHFQNQRHVHLV
LENDANQARFLTRHREGDPRWHSAQWNDDLHHCLHSAATGEDGGYYADYAHDPAKWGRTL
AEGFAFQGEPSAYRDGELRGEPSAHLPPTAFVTFIQNHDQIGNRAFGERISHIAKPEAVR
AATILYLLGPGIPMLFMGEEWASAKPFPFFCDFGEELAEAVRKGRAEEFAKFPEFQDPEA
RARIPDPTEPETAESAKLDWEARGTPEHAGWLDWYRRALTLRRAEIVPRLDGVPGGASSH
GVAGKTGLTVCWKLGDGSRLHAFANLADSPAAGFPEASGRVLWTEGAGLTGDTLGPWSVV
LWLEEASALDRLADRMGVERSFDNAAGETVTASEDTVRALLSAMGVEAGDEAAALAHLDR
LDEEEYGRALPPAVVRRAGEAVTVPVTLPHGTRTLRYTLTLESGQTQSGVVGFGSLPRCR
CITAGDVTYAERRLPLGRLAQAGYHTLRVETEHGTAETRLILAPARCHLPTPMLVGEKLW
GLSAQLYTLRSDHDWGIGDFGDLRTLADIAAARGAAVIGLNPLHAMFLDNPEHASPYSPA
SRLFLNPLYIDVTAVAEFLDDAELRKEVASPEFRQALEAARATANVDYTAVSGLKLPMLE
KLFAGFQTSAKPDRRAAFDAFRTEGGIGLERFATFQALRECFAADGKADWHRWPAEFHDA
TGPAVERFAKDNSDRVAYFAWLQWLADDQLRLAAERAADLGMAIGFYRDLAVGADASGAE
TWMTPQAVVDAAHVGAPPDLFNPAGQDWGLPPFHPQALRAAGYQPFIDLVRANMRHAGAL
RIDHAMALQHVYWIPDGHPPGEGAYVAYPMEDLLGILALESQRHRCLVVGEDLGTVPEGF
RERMTEAGVLSYRVVFFEWTEDGAFKGPDEYPELALATVGSHDLATLRGWWEGDDITLKA
ETGLYPADDEEEKQQTRRSADRGALVDALRAAGIALPAGLTPDSPYDEALDHAVHAFLAR
TSAALAVAQLDDLTRERDQVNLPGTTDQYPNWRRKLSMTLEELADAPEPAAVADILAAAR
PSSAPVRA