Protein Info for MPMX19_04183 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 483 transmembrane" amino acids 23 to 44 (22 residues), see Phobius details amino acids 65 to 85 (21 residues), see Phobius details amino acids 97 to 115 (19 residues), see Phobius details amino acids 121 to 145 (25 residues), see Phobius details amino acids 292 to 313 (22 residues), see Phobius details amino acids 457 to 477 (21 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 32 to 482 (451 residues), 322.3 bits, see alignment E=3.2e-100 PF13727: CoA_binding_3" amino acids 80 to 212 (133 residues), 29.2 bits, see alignment E=8.8e-11 PF02397: Bac_transf" amino acids 287 to 479 (193 residues), 202.6 bits, see alignment E=3.8e-64

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_a06920)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (483 amino acids)

>MPMX19_04183 hypothetical protein (Azospirillum sp. SherDot2)
MSKLDPEVVIDLTSTKKATIPTIAPGLLLALSDGLVLALVGWTLNHFLGADALTEPMEAA
AWQRSLVTGLMLVPLVKSVFGIYTLGRFDYMERTRRTFQAAFLCCAVLAVPFIVMEGFRS
FFVEALSIALLGFAVTYVADLLLIQGLLSSALDWRTPVMIVGAGPQGAAIAEKLQRLPWL
GMRPVGFVDDDDSLWQTRVAGLPVMGPVELLAKSPAVAGQASAAIVADMGRHGSDLTGLV
RTLPFRQVYCVLGEGNVSAVDATYHNLHGSLALRVSVRPPTGYLRIRRAMDIVLSAILLV
LVAPLMLGLAVAIRLDSPGPVMFRQKRWAGGKQTFDLLKFRSMHVDAEEQLQHLLANDPV
AREEYMTYHKLTVDPRITPLGRFLRKTSLDELPQLWNILMGDMSLIGPRAYMPKELPEVG
DSAAVIGTVRPGLTGYWQVSGRHRTTFQERVAMDVFYVRNCGLLFDFFILCKTAVMVLKG
DGS