Protein Info for MPMX19_04101 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 97 to 122 (26 residues), see Phobius details amino acids 149 to 167 (19 residues), see Phobius details PF01595: CNNM" amino acids 6 to 200 (195 residues), 170.3 bits, see alignment E=5.5e-54 PF00571: CBS" amino acids 215 to 270 (56 residues), 16.6 bits, see alignment 1.2e-06 amino acids 286 to 334 (49 residues), 37 bits, see alignment 5.4e-13 PF03471: CorC_HlyC" amino acids 350 to 428 (79 residues), 81.1 bits, see alignment E=7.3e-27

Best Hits

Swiss-Prot: 43% identical to Y260_SYNY3: UPF0053 protein sll0260 (sll0260) from Synechocystis sp. (strain PCC 6803 / Kazusa)

KEGG orthology group: K03699, putative hemolysin (inferred from 94% identity to azl:AZL_a03000)

Predicted SEED Role

"Magnesium and cobalt efflux protein CorC" in subsystem Copper homeostasis: copper tolerance or Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (434 amino acids)

>MPMX19_04101 hypothetical protein (Azospirillum sp. SherDot2)
MIWELLVIVLLILLNAFFAMSEMALVSARRARLQQMAEEKGGAGARAALELSEDPSRFLS
TVQVGISLTGIIAGAYGGSTLAERLGGVLDEQVAWIAPYGHTVAFALVVAAITYFSLIIG
ELVPKRVALISSERIASLVASPMRTVSRLSAPVVWLLGVSSDAVLKLLRLPTSREQTVTE
EEVKTLIAEGTQSGVFEPAERQMIEGVMHLSDRTVRSIMTPRPDLMWLDIDDSPETLARE
ICESGYSRFPVCRGDVDEVQGIVATKALLDQSLKGISFDLRTAMVQPLVVHDGTPVFRLL
DLFKQASVHMAVVVDEYGSVEGLVTMTDILEAIAGELPDSTQEGEANAVQREDGSWLVDG
MTPVEEVEALVGVKNMKGEGDFHTIAGFLLDRFGHVPTAAEHFHWNGIRFEVVDMDGRRI
DKVLIQLNPEVSEG