Protein Info for MPMX19_04089 in Azospirillum sp. SherDot2

Annotation: Flagellar biosynthesis protein FlhA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 723 transmembrane" amino acids 37 to 56 (20 residues), see Phobius details amino acids 62 to 80 (19 residues), see Phobius details amino acids 92 to 112 (21 residues), see Phobius details amino acids 128 to 153 (26 residues), see Phobius details amino acids 224 to 245 (22 residues), see Phobius details amino acids 266 to 284 (19 residues), see Phobius details amino acids 296 to 319 (24 residues), see Phobius details amino acids 324 to 342 (19 residues), see Phobius details TIGR01398: flagellar biosynthesis protein FlhA" amino acids 36 to 723 (688 residues), 868.1 bits, see alignment E=2.2e-265 PF00771: FHIPEP" amino acids 46 to 715 (670 residues), 835.8 bits, see alignment E=1.4e-255

Best Hits

KEGG orthology group: K02400, flagellar biosynthesis protein FlhA (inferred from 96% identity to azl:AZL_a02890)

Predicted SEED Role

"Flagellar biosynthesis protein FlhA" in subsystem Flagellar motility or Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (723 amino acids)

>MPMX19_04089 Flagellar biosynthesis protein FlhA (Azospirillum sp. SherDot2)
MALTEHNGGGGGGGPGNMAAFGEMWAVTKASLKRGDVAMAIGILIVVVGLIMPLPAVMLD
MMLGLNVTISILILMVVLFIEKPLQLSSYPTILLITTLLRLSLNMASTRLILTQGHEGTS
AAGHVIEAFASLVMGGDFVIGVIIYAILTIVNFKVITAGSGRIAEVAARFTLDAMPGKQM
AIDADLSAGMIEESTARARRKELEDESAFFGSMDGASKFVKGDAVAGLMIMFINIIGGVT
IAVLRHDMPVMTALDTFTKLTIGDGLVSQIPALVISISAGFLVSKAGMGGSTDKAVVGQL
TGHSQALALSAGAVGVLALLPGMPILTLAPVIGIVGFAAWYMPRLRAKKEAEEAAAAEEA
AAAGAGPGGMPGAGPAPDEPIATALAIDLIRLELGYGLLSLINQPQAGSHRLTDQIKGLR
RQIAGEVGFVMPAVRIQDNLQLPPNTYIIRIKEIEAGRGDIRPNMLLVMDPRGDAMSLPG
EQTVEPTFGLPAIWIEPGYREEALFKGYTVVDPSTVVTTHLTELIKDNMPELLSFTETQK
LLDETDKEHQKLIADVVPGQITVGGLQRVLQNLLAERVSIRDLPTILEGVSEATSQTRSI
TQITEHVRSRLARQICDANTNEMGFIPLVTLSPEWEQGFAESLVGDGDDRQLTMAPSRLQ
QFITSVRQTFERHAMMGESPVLLTSPLIRPFVRSIVERFRPATVVMSQNEIHPKARIKTL
GQI