Protein Info for MPMX19_04030 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 477 PF07063: HGLS" amino acids 31 to 429 (399 residues), 542.6 bits, see alignment E=3.5e-167

Best Hits

KEGG orthology group: None (inferred from 89% identity to azl:AZL_a08080)

Predicted SEED Role

"FIG00960493: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (477 amino acids)

>MPMX19_04030 hypothetical protein (Azospirillum sp. SherDot2)
MSVQTITRVDATRADATRADVIGPDAIRTLFSTSMSEMYRTEVPAYQTLVELVEEVNAAL
LAADPAERHRLDSTGGLARITEERHGAIRLGTADELSTMRRLFAVMGMQPVGYYDLSEAG
VPVHSTAFRPVDGEALSRNPFRVFTSLLRLDLIADAALRQEAETVLAARSIFTPGCLALI
ERAEADGGLDEEDAGRFVAEALETFRWHSRANVPLDLYNRLHDAHRLIADVVSFKGPHIN
HLTPRTLDIDAVQRLMPEKGIAPKAVVEGPPTRRCPILLRQTSFKALSEPVDFQASDSEG
DGWRSGVHTARFGEIEQRGIALTPKGRALYDTLLQDSRRLVAPAADGSNAAQYMAALQEV
FAPFPDSWDGIRRQGLGYFSYSLTEAGRRSPPAPGADLETLIGSGAVRFDPVVYEDFLPV
SAAGIFQSNLGDEAQQDFAASPNQQRFEADLGAQVLNPFDLYAEIERASIAACLAAK