Protein Info for MPMX19_03913 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 505 transmembrane" amino acids 20 to 50 (31 residues), see Phobius details amino acids 61 to 85 (25 residues), see Phobius details amino acids 106 to 133 (28 residues), see Phobius details amino acids 139 to 160 (22 residues), see Phobius details amino acids 167 to 188 (22 residues), see Phobius details amino acids 201 to 220 (20 residues), see Phobius details amino acids 228 to 246 (19 residues), see Phobius details amino acids 258 to 279 (22 residues), see Phobius details amino acids 315 to 338 (24 residues), see Phobius details amino acids 354 to 377 (24 residues), see Phobius details amino acids 390 to 422 (33 residues), see Phobius details amino acids 464 to 486 (23 residues), see Phobius details PF01970: TctA" amino acids 21 to 438 (418 residues), 480.5 bits, see alignment E=2e-148

Best Hits

KEGG orthology group: K07793, putative tricarboxylic transport membrane protein (inferred from 73% identity to ecq:ECED1_4529)

Predicted SEED Role

"Tricarboxylate transport membrane protein TctA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (505 amino acids)

>MPMX19_03913 hypothetical protein (Azospirillum sp. SherDot2)
MHELNMLMNGVATLAANPMALLLSLVGVALGIVIGALPGLTATMGVAILLPFTFGMDPVS
GLLMISGVFFGGVYGGSVTAILLKIPGTPAAAATAMDGFELTKKGMAGVALGTATLSSFL
GGMASILVLIFLAPVLAGFALEFSASESFALAVFGLSIIASISGKSVVKGLIAGFLGLLI
ATVGMDPMGGFPRFTGGYTELFNVPFIPVMIGLFAAAEAFKSMEDPKVRLGMAAALGRIV
PPWATYKSLLGVVSRSSILGIVIGIIPGAGSDIAAYVAYNEARRFSKTPENYGKGELGGV
AACEAGANGCTGGALLTMLTLGIPGDAVTAVMLGALTLQGLQPGPLLFKEHGDLVFTLFA
GMIFCYVGMLVLGLGSLRFMGRILQMPKSVLTPVILALCVVGTYAINNSLFDIGIMLAAG
VAGYFMQKWDFPASPVVLALIMGPMAEANFRRALSLSGGSYDFLYSRPITAVLLTVAILT
MLLPLVKRWRAERAGVSSGPVEATK