Protein Info for MPMX19_03863 in Azospirillum sp. SherDot2

Annotation: putative MFS-type transporter YfcJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 397 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 49 to 72 (24 residues), see Phobius details amino acids 84 to 108 (25 residues), see Phobius details amino acids 110 to 141 (32 residues), see Phobius details amino acids 150 to 172 (23 residues), see Phobius details amino acids 178 to 196 (19 residues), see Phobius details amino acids 218 to 243 (26 residues), see Phobius details amino acids 252 to 271 (20 residues), see Phobius details amino acids 283 to 300 (18 residues), see Phobius details amino acids 306 to 327 (22 residues), see Phobius details amino acids 342 to 363 (22 residues), see Phobius details amino acids 370 to 392 (23 residues), see Phobius details PF07690: MFS_1" amino acids 23 to 325 (303 residues), 93.1 bits, see alignment E=8.4e-31 amino acids 256 to 394 (139 residues), 54.9 bits, see alignment E=3.6e-19

Best Hits

Swiss-Prot: 40% identical to YFCJ_SHIFL: Uncharacterized MFS-type transporter YfcJ (yfcJ) from Shigella flexneri

KEGG orthology group: None (inferred from 69% identity to bph:Bphy_6796)

Predicted SEED Role

"Xanthine transporter,putative" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (397 amino acids)

>MPMX19_03863 putative MFS-type transporter YfcJ (Azospirillum sp. SherDot2)
MANAASSSQSGRFVAIRLMPIMAAVLAGFLIIGLALPVLPLHIENDLGFGTVVVGLVAGA
QFAASLVSRVWAGSFSDKHGAKRGVIVGLIAAAISGLLYLLSLAFVSVPVISVAILLIGR
GLLGGAESFIITGGVSWGLALVDKNHAGKVIAWVGTAMFAALAFGGPIGTVLFTSSGFAV
IALVTMLLPIIVLLVLRRMPAVEPHPYRAHSALKTVMGSVWMPGLGAALSSIGYCSILAF
SSLLFAEQHWQPIWLPFTAFGAALIVSRMIAGHLPDKYGGAKVALIFVLVQSAGLVFMSL
ASSALIAAAGAALAGFGYSLVYPGLGVEAVRGTSPENRGLTMGIYTAFLDLAMAVGSPAL
GWVAGERGLSSVFIASAIVVLCAGGIAIKLLYRRSVA