Protein Info for MPMX19_03809 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2112 transmembrane" amino acids 429 to 456 (28 residues), see Phobius details amino acids 1093 to 1100 (8 residues), see Phobius details amino acids 1201 to 1224 (24 residues), see Phobius details amino acids 1235 to 1255 (21 residues), see Phobius details amino acids 1261 to 1279 (19 residues), see Phobius details PF06791: TMP_2" amino acids 373 to 575 (203 residues), 71.4 bits, see alignment E=4.4e-24

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2112 amino acids)

>MPMX19_03809 hypothetical protein (Azospirillum sp. SherDot2)
MSDMTLVLRIKADGTAEVVGAAKQVEAAVAGIGAAGAEAGRIAKAATDEAALAQAKLARL
VQETATPVERLKARLAELETLAPFAGTAEQARALARATDELDRAIASHSDEVRIAAAAQE
RLADLVEKTRTPVDRLQATLAELERLRPFATSVEEAQALSHAITAAEAALEGHSEAARQA
ASAQSRLAALIDETRTPVERLQGRLAELAALRPFATTEADADALTRAITSTEAALEGQST
SARDAAAAQSRLAAIMVETATPVERLRARLDELRALRPFAQSIPEAQALARAIEATETEI
AQSTDAARAAVAAQGQLAQVIARTRTEGEKLEAELLRLEALRPFARTGEEAIALERALAR
VRAGMAATNSGAAAMARTTGLAAHEMTNLSFQAQDFIVQVGSGQGIFRPLLQQGPQAVMA
VGGLSRAMALLLTPTSLVAAGFGAVALAGATVLARASAITAEVREMDIRLRALNPNLNAT
GAALRTMAQGIADERGVTRQDATSAVRTIALNPRIGDAALVRSLAALAQDVQAVLGGSVE
EVAAKLADAFAGGAAGVRKLDEELGFLSVEEAKNIALMGRHSDQTGALATAMEALQRRFG
GATKQMRSDAAEAFHELEREWDNLIEKLGSSDLAQALMRGLGQALKGMSWWVAGMPEEIQ
KARDLAETSALLDRTRNELAGMVERGHGDMPPANNLRQQLQALQQRYYDLQRQNGPAGGR
ATAPPLTRSANDITPEISQSAANQKWLNDERQAYEDLSVAMKGTAAQRVLNRAELEANRE
ADRRNMGDTARLGLIELRRKEALVEMTAAENDRSSAVDRATTLNTQYTQELLRFTSSSAD
AVEHTIRHKAAMEAQAAAASNAAVSVQAMTSQLVLSAAAQAAADGAKTVSDLQTRVEWEE
KVADAARGGAAAQAEAERQAEAAAQTSALLGAAQAAEAEGAAELGQLLRELAADYETLSK
RSDEARKRRQGEESLRTARAELEMAQAELGLMGRAEPYRERALRSLQIQQQAAQMAKSAT
TEQIAEWVRLQEQIADAQALVNFQKEVQATSKEIAGSISENLYDRLMDPSKATSMVDVFK
SIFKRIALAALEANIVLPIVTQVVGAMPSLFGIQAPAGAGGVAGASQGSGGLMSNATNLF
SLGRAGWQMLSGGSGLAATQAAGSFATSSLGEALGLSTSAAGVIPEAAATDMMLTSTGNA
VVGAAGTIGAAMPYGVVGGVLGGLAGTAMNSKAGGALVGAAAGAGAAGIGAGIWGMSAVG
GPWGIAAAAVISAVMAMLGTQKKTVGPNSSGNVTLDGSGGFRTDQALADNGADAGQMQQV
TDSIAKAMNAVITGIGGKLTGGDGANTGLIQYFQKDNKWFVTPQVGDKAGQKTEFTDQSQ
AVQFYMRESLKGLIGNGSLTGVNDDVKTVLAKSNATTSESLTKHLQLAATFQDSVDAMNN
AIGLEDTARKQGKTAAADLTIAIKDFRQTASDAGLDATKAANATRNWVDTLVSGADPKTY
TVYEAQAAQYRAQWSNMGDVLQAVGYSAADAAKKMDEGLNNSLKKLAKTLNTSLDQQINS
ALGRDFLNQITKSLEDEQTNARDLAAVGEPITKAQTLRAAQLNSIMTQLNATQLDVITST
YGATSDIGKLAQTIKAMSADAGTTAASLASFQADVQSRLYGALGNTRGSELIALDVQQAK
ALADAKTAGYDTTVLQQVQAAERAAKAFQLAKADVDGAYEAQITAQQDYITTLSNGAVKI
AQSARAFRSAFDSLALADTSPLSDKERLEEARRQFGTAAGTFRSQTATDDEREAAKQSLL
SLGPSLIQLARSYFGPTNSTDYDWVREVFAEFGDTTAMGVDAAERQLATANKTLAEMQAN
RASAAAIGQMQYGELSSLNSIMNQSYLVWQSSLTALQRMAGTTSSTSPTTLVDATVEDKR
RRLEAFSNADIEAAFGQFADIQAARQANPAFNLALWFQTYGLSEVLNGTRKIPGFATGTD
SAPAGWAWVGENGRELIQLAGGERVYPHTESKAIAQSWATANDHLPVNATGFRPRVTTSD
AGLSALAAEIRASREAARRNAREIGAAVADAADRQAAVAREEGVELRRRVDKQGADFRIS
LSSLQYNKKRAA