Protein Info for MPMX19_03755 in Azospirillum sp. SherDot2

Annotation: Copper transport protein YcnJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 567 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 154 to 174 (21 residues), see Phobius details amino acids 186 to 210 (25 residues), see Phobius details amino acids 230 to 251 (22 residues), see Phobius details amino acids 260 to 280 (21 residues), see Phobius details amino acids 287 to 310 (24 residues), see Phobius details amino acids 331 to 351 (21 residues), see Phobius details amino acids 363 to 382 (20 residues), see Phobius details amino acids 410 to 430 (21 residues), see Phobius details amino acids 445 to 465 (21 residues), see Phobius details PF04234: CopC" amino acids 32 to 123 (92 residues), 80.2 bits, see alignment E=1.9e-26 PF05425: CopD" amino acids 323 to 426 (104 residues), 80.4 bits, see alignment E=1.2e-26

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (567 amino acids)

>MPMX19_03755 Copper transport protein YcnJ (Azospirillum sp. SherDot2)
MRPSPRRRLTGLSVLFFAVLLLAALPRTGWAHAVLMESVPADGASLDAAPAALSLEFNEP
VTPVRIQLLDQQGRDMADPQGALAEDNRVRLALPPGLPKGLYVASYRVTSADGHPVAGSF
TFGIGVTPAPTTGTPPVDDPSRATAFAGLLLRAMHYAALLAGTGGGLFLVLVTGRWAPLN
DRLKPVLCLTLLVAGLSAVLLVGVTGATLAGQPLATLATGAPWTTGAGSSVGLSAGIALL
ALLCSACGLAIEARSAMGPALLVAGALLGAASLAATGHAATAPPRWLSAPLVGLHGLMAA
FWVGAFWPLSMALRLESPAEAARLTRRFSRIAIGAVAILAGAGMVLSAIQLQSVQAILSS
GYGWVWLGKMLAVLLLLGLAAWNRQVLTPALDQSGDRNGGRAVRSLRRSIGLEMAAAGTA
LLLTAAFALTPPPRALHASEEKPPAGFSAVAVKGGLIALIDVGPAMPGRNGVRLHLQNED
GKPVTAREVTMNWELPSAGVAPLRHALTSFGPGFFGADDTTLPLAGQWSLRLEVLIDDFD
KRVFQTEVPIRETPASTEGIPTSPNLR