Protein Info for MPMX19_03680 in Azospirillum sp. SherDot2

Annotation: 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 384 PF00561: Abhydrolase_1" amino acids 111 to 345 (235 residues), 71.1 bits, see alignment E=2.3e-23 PF12146: Hydrolase_4" amino acids 112 to 215 (104 residues), 41 bits, see alignment E=2.8e-14 PF12697: Abhydrolase_6" amino acids 114 to 350 (237 residues), 70.3 bits, see alignment E=7.7e-23

Best Hits

KEGG orthology group: None (inferred from 89% identity to azl:AZL_b04610)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (384 amino acids)

>MPMX19_03680 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (Azospirillum sp. SherDot2)
MPDQMLVEPVLTMPCPSFAGETLPVHGRHDGAMETLRVTLEALGIGSVEEMTWKNYETIM
RVVEPLIGAGHRLRHFDYTHSAALQLGTVERLRTDYTIRLAYTEWGSPQNPALLCLGGIA
NSARRFDYVARALSHRYHVLCLDWAGRGRSGWLADQSDYSFDGTVAQVLALIRHKQLGPV
TLLGSSLGGSVAMRVAAEAPDLVERLILNDIGPFIPTERRRRRAESVARHYVFRHPAQLF
HRTGAAQKNDGPVDDTVLLHNSFHQTRWSEENGGRVYRHDIRALQCYRDGAIQDHDQWDD
WQRIDCPVLLVHGMMSDALQEATIARMMGKPGLSVLHVPDVGHTPTLSDPLHIDALARWM
SAPHTLPAESTIGWTAGAARILFR