Protein Info for MPMX19_03661 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 787 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 251 to 269 (19 residues), see Phobius details amino acids 275 to 297 (23 residues), see Phobius details amino acids 303 to 323 (21 residues), see Phobius details amino acids 342 to 362 (21 residues), see Phobius details amino acids 368 to 387 (20 residues), see Phobius details amino acids 417 to 435 (19 residues), see Phobius details amino acids 640 to 659 (20 residues), see Phobius details amino acids 665 to 686 (22 residues), see Phobius details amino acids 692 to 712 (21 residues), see Phobius details amino acids 725 to 745 (21 residues), see Phobius details amino acids 751 to 772 (22 residues), see Phobius details PF03176: MMPL" amino acids 179 to 391 (213 residues), 61 bits, see alignment E=4.8e-21

Best Hits

KEGG orthology group: None (inferred from 50% identity to pna:Pnap_1374)

Predicted SEED Role

"FIG021862: membrane protein, exporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (787 amino acids)

>MPMX19_03661 hypothetical protein (Azospirillum sp. SherDot2)
MTAAARRGRWNIALWLAGLVVCGLLVARTSVTADLSAFLPRSPSATQQLLVDQLRDGVVS
RLILVAVEGEAPDRLTGLSRALAARLRGNPLVAAVENGERTGRSADGAYLWTNRYLLSPG
VTPDRFTVEGLHAALQNDLRLLQSPAGMALKQALPADPTAEILRLTDRMLGDTAGPASRD
GVWVSADGARALLLVQTAAPGFDMDAQQKTLELIQGAFDEARGAAGPARLVMTGPAVFSV
QTRDRIEADATRSSIVATALVAGILLLVYRSLRVLALSLLPAATGTLAGIAAVELGFGTV
HGITLGFGVTLLGESVDYAIYLFTQTQPGSPAHRTLRRIWPTVLLGMATSVVGFGTMLFS
SFSGLAQLGLFSLTGLVVALAVTRWVLPSLLPDGYATERPARLAPVLTALTRGAPALRLP
LAAATLLSLAWLAYQGPAIWSAELSSLSPVAEADQRLDEALRRDLGAPDAGHLLVTGAAT
VEEALAAAERLAAPLEAMTSDRLIAGYESPAHTLPSQAAQRARQAALPTPDRLRASLTEA
LQGLPFRPDAFAPFLADSEKARTMPLLTPASLDGTSLKLKVDSLLVHSGTGWTAMLPLRG
VTDPKALAARLAGDPAAQGATLLNLKEESDSLYRTYRQEALTLALLGAVAITLLLALALR
SVRSLVAAVMPLAAAVVVTMALVTALGQTLTIFHLVGLLLVVGVGSNYSLLFERPEPSPA
LRERTVASVVIANLCTVIGFGTLALSSIPVLHGIGMTVAIGAFLCIAFAAVLGRPQQPAE
PEGAGHG