Protein Info for MPMX19_03659 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 325 transmembrane" amino acids 34 to 50 (17 residues), see Phobius details amino acids 56 to 72 (17 residues), see Phobius details PF03279: Lip_A_acyltrans" amino acids 110 to 280 (171 residues), 41.3 bits, see alignment E=5.6e-15

Best Hits

KEGG orthology group: None (inferred from 51% identity to eba:ebA7063)

Predicted SEED Role

"Lysophospholipid acyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (325 amino acids)

>MPMX19_03659 hypothetical protein (Azospirillum sp. SherDot2)
MKLPLRAKRTADAAASPIAPPSPRRRRREWMNRPERSTTAAIKFIVWVALRLGRRAARLL
LYPICLYFVLFSRKPRRASALFLSKALGRPPGFGDLFRHYHVFAACLLDRVFFLNDQSDD
FDVRVHGEDIVIDLMERGEGCLLIGAHMGSFEAIRMLGHRQHDLRVSLVMYEENARKINS
VLNAINPLLSMEVIALGRPDSMLRVRERLDQGHFVGMLADRTLDGEEEVRLPFLGQPAGF
ALGPFQLAAMLKRPVVLMVGIYQGGRRYDVHFERIADFSDLKKHDWPVQERSGLVRWAAG
RFADRLEHYALSFPYNWFNFYDFWK