Protein Info for MPMX19_03607 in Azospirillum sp. SherDot2

Annotation: PTS system N-acetylglucosamine-specific EIICBA component

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 45 to 71 (27 residues), see Phobius details amino acids 79 to 100 (22 residues), see Phobius details amino acids 111 to 128 (18 residues), see Phobius details amino acids 148 to 168 (21 residues), see Phobius details amino acids 174 to 193 (20 residues), see Phobius details amino acids 199 to 217 (19 residues), see Phobius details amino acids 237 to 260 (24 residues), see Phobius details amino acids 269 to 287 (19 residues), see Phobius details amino acids 293 to 315 (23 residues), see Phobius details amino acids 322 to 340 (19 residues), see Phobius details amino acids 346 to 367 (22 residues), see Phobius details TIGR01998: PTS system, N-acetylglucosamine-specific IIBC component" amino acids 14 to 477 (464 residues), 606.5 bits, see alignment E=3.3e-186 PF02378: PTS_EIIC" amino acids 18 to 311 (294 residues), 229.8 bits, see alignment E=4.7e-72 TIGR00826: PTS system, glucose-like IIB component" amino acids 369 to 466 (98 residues), 56.7 bits, see alignment E=2.3e-19 PF00367: PTS_EIIB" amino acids 410 to 441 (32 residues), 43.6 bits, see alignment (E = 1.5e-15)

Best Hits

KEGG orthology group: K02803, PTS system, N-acetylglucosamine-specific IIB component [EC: 2.7.1.69] K02804, PTS system, N-acetylglucosamine-specific IIC component (inferred from 95% identity to azl:AZL_b05060)

Predicted SEED Role

No annotation

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.69

Use Curated BLAST to search for 2.7.1.69

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (488 amino acids)

>MPMX19_03607 PTS system N-acetylglucosamine-specific EIICBA component (Azospirillum sp. SherDot2)
MSADRLSGDRFSGVQRLGRALMLPIAVLPIAGLLLRIGQPDLLNIAFIAAAGDAVFSNLG
VLFAVGIAIGFARENHGAAGLAGAVGYFVAVKGAVVLSGVAPDLVAKMSSRISIPVGILI
GIIAGQLYNKYKDIKLPDYLAFFGGRRFVPIVTGLAALGIALIFGYGWPVVDSGLTALTT
GVLGLGKIGLFLYGVLNRILIITGLHHIINNIAWFLLGDYQGVTGDLNRFFKGDPTAGAF
MSGFFPVMMFGLPAACLAMYHTAKPENRAAVGGVLLSMALTAFLTGVTEPVEFAFIFLAP
ALFAVHAVLTGLSMVLMDVLNVKLGFGFSAGLFDYVLNYGKATNPILLLPVGAAYFAIYY
GLFRFVIQRFDLKMLGRDDIAIPAGQAPAATGVRPAAAGIAPVSDRAGAYVAALGGAGNL
RSVEACTTRLRLNVADASRVNEVELKRIGARGVVKPSANSVQVIVGPIADQLAGEIQDSL
NASAGLRV